AT2G07360.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plastid 0.859 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : SH3 domain-containing protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
SH3 domain-containing protein; FUNCTIONS IN: binding; LOCATED IN: cytosol, nucleus; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Src homology-3 domain (InterPro:IPR001452), Armadillo-type fold (InterPro:IPR016024). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:3047623..3057099 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 130351.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.41 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||
| Length | 1198 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MAESSGTTLM DLISADPTPV PAQSTSSSAS STASQPTSAS ASSSSHLHHP MSTKTTLGEK KSKRATLMQI QNDTISVAKA ALNPVKANIM PQRQRQKKKP 0101: VSYSQLARSI HELAATLDQK SSQKQLVNHV FPKLAVYNSV DPSLAPSLLM LNQQCEDRNV LRYVYYYLAR ILSDTGMTPG GGIPTPNWDA LADIDAGGGV 0201: TRADVVPRIV NQLTNEATNS EFEFHARRLQ ALKALTYSPS GNSELLSKLY EIVFGILEKV GDVPHKRKKG VFGTKGGDKE SIMRSNLQYA AMSALRRLPL 0301: DPGNPLFLHR AAQGVFFADP VAVRHSLEIL SELATRDPYT VAMTLEKLAS PTGALQDILH MNDVLARVSL ARLCHSISRA RALDERPDIR SQFNSILYQL 0401: LLDPSERVCY EAILCILGKH DNTERHEMDE RAAGWYRLTR EILKLPEAPS LSSKDKSNKT KRPQPLIKLV MRRLESSFRS FSRPVLHAAA RVVQEMGKSR 0501: AAAFAMGLQD IDESVHVNAF SDALDDAETN ESSHPEGIRR TSSISAGPGR SDTIASLLAA LMEVVRTTVA CECVYVRAMV IKALIWMQSP DESLDELKSI 0601: IASELSDPGW PAALVNDVLL TLHARFKATP DMAVILLEIA RIFATKVPGK IDADVLQLLW KTCLVGAGPD GKHTALEAVT IVLDLPPPQP GSMAGLTSID 0701: RVSASDPKSA LALQKLVQAA VWFLGENANY AASEYAWESA TPPGTALMML DADKMVAAAS SRNPTLAGAL TRLQRCAFSG SWEVRIVAIQ ALTTIAIRSG 0801: EPFRLQIYEF LYTLAEGGVQ SQLSEMHLSN GEDQGASGTG LGVLITPMLK VLDEMYVGQD ELIKDIRHHD NANKEWKDEE LKKLYENHER LLDFVSMFCF 0901: IPRAKYLPLG PISAKLIDTY RTKHNITAST GSTDPAVVAT GISDLIYEST QPAPAASNSS GLDDDLVNAW AANLGDDGLL GNNAPAMSRV NEFIAGVGTD 1001: APDVEEENVF SRPSVGYDDM WAKTLLETSE LEEEDARSGS SSPDSAGSVE SSISSHFGGM NYPSLFSSKP SSQATAKSGG SKYQSTYEGY GSPIREEPPP 1101: PYSYSEPQSR ESFENPVAGS GSRSYESDDE EPRKSTGTRF GTALYDFTAG GDDELNLTAE EELEIEYEVD GWFYVKKKRP GRDGKMAGLV PVLYVNQS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)