AT2G01460.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.939 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: nucleoside-triphosphatase activity, nucleotide binding, kinase activity, phosphotransferase activity, alcohol group as acceptor, ATP binding; INVOLVED IN: biosynthetic process, metabolic process; LOCATED IN: cellular_component unknown; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: 4 anthesis; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), Phosphoribulokinase/uridine kinase (InterPro:IPR006083), Uridine kinase (InterPro:IPR000764); BEST Arabidopsis thaliana protein match is: Phosphoribulokinase / Uridine kinase family (TAIR:AT1G26190.1). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:206136..211765 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 106564.00 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.02 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.17 | ||||||||||||||||||||||||||||||||||||||||
| Length | 954 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDDEVVQRVF QEGGRDFFQQ QPSTSSSSSS ILQSLPLHVA FDHGYYLLVK SIQELREKKD GIVTVGIGGP SGSGKSSLAE KVASVIGCTV IAMEDYRDSL 101: DDGNELETLD FDALVQNLED LINGKDTLAP VFDFQQKKRV DSKMVKTSSG VVIVDGTYAL HARLRSLLDI RVAVVGGVHF SLLSKVRYDI GDSCSLDYLI 201: DSIFPLFRKH IEPDLHHAQI RINNSFVSSF REAIYKLKCK TEIVTSFPQE SDVQKDNFIE MYLRPPSASE EARINDWIKV RQAGIRYYLS LGDQRIVDKH 301: FIIRPKAEFE VGRMTLGGLL ALGYNVVVSY KRASTAVSYG NLSLSRETID TLGETFLVLR GTDRKSVGAE ALRMGITGPW ITKSYLELIL ESKVQQNLNF 401: CKLTHFAGVP RLNTPPLLQP SPVITNQEKQ IVAPKPIRTT PNIVTRLEDL SQPWTRSPTK SQMEPMVATW HFTSYDPPHS VSSVVDSSFR DNMRLVPMPD 501: SYDLDRGLLL SVQAIQALLE NKGPPVIVGI GGPSGSGKTS LAHKMANIVG CEVVSLESYF KSEQVKDFKH DDFSSLDLPL LSKNISDITN SRRTKLPIFD 601: LETGTRCGFK ELEVPEECGV VSDHSLHISY EIRQSLDLWV AVVGGVHSHL ISRVQRDKSR IGCFMSQNEI MMTVFPMFQQ HIEPHLVHAH VKIRNDFDPV 701: LSPESSLFVL KSNKQVPYQD ILSILDSTKF CSSVQNFIDI YFRLSGLPAN GQLSDSDCIR VRICEGRFAV LIREPIREGN FIIQPKVDFD ISVSTVAGLL 801: NLGYQAVAYI EASAFIYQDG KVNVPSPYIQ IKGANKEAVT AAGSALKLDG SYTTKSYLQI VLERLPPVQR SSSGIHTQQA ARLQELVEFI QSQGSSNSVS 901: ESSPRRDGSS IDNVLEDMQS RIKRLERWHT INTVLWTFLM SALVGYSLYQ RKRQ |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)