AT1G74910.3
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : ADP-glucose pyrophosphorylase family protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
ADP-glucose pyrophosphorylase family protein; FUNCTIONS IN: transferase activity, nucleotidyltransferase activity; INVOLVED IN: response to cadmium ion, biosynthetic process; LOCATED IN: peroxisome; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Trimeric LpxA-like (InterPro:IPR011004), Nucleotidyl transferase (InterPro:IPR005835); BEST Arabidopsis thaliana protein match is: ADP-glucose pyrophosphorylase family protein (TAIR:AT2G04650.1); Has 8747 Blast hits to 8740 proteins in 1996 species: Archae - 635; Bacteria - 5603; Metazoa - 382; Fungi - 295; Plants - 426; Viruses - 0; Other Eukaryotes - 1406 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:28135852..28138456 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 42899.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.69 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||||||
| Length | 387 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGSSMEEKVV AVIMVGGPTK GTRFRPLSLN IPKPLFPIAG QPMVHHPISA CKRIPNLAQI YLVGFYEERE FALYVSAISN ELKVPVRYLR EDKPHGSAGG 101: LYHFRNLIME DSPSHIFLLN CDVCCSFPLP KMLEAHRGYG GIGTLLVIKV SPESASQFGE LVADPVTNEL LHYTEKPETF VSDRINCGVY VFTPEIFNAI 201: GDVSTQRKDR ATLKRVSSFE ALQPATRIPT DFVRLDQDIL SPLAGKKRLY TYETMDFWEQ IKSPGMSLRC SGLYLSQFRL TSPQLLASGD GTRSAIVIGD 301: VYIHPSAKVH PTAKIGPNVS ISANARVGPG VRLMSCIILD DVEIMENAVV TNAIVGWKSS IGRWSRVQAW SLQFETRSYN SRRLGCS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)