AT1G67520.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 0.819 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : lectin protein kinase family protein | ||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
lectin protein kinase family protein; FUNCTIONS IN: in 6 functions; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), PAN-2 domain (InterPro:IPR013227), Apple-like (InterPro:IPR003609), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635); BEST Arabidopsis thaliana protein match is: lectin protein kinase family protein (TAIR:AT3G16030.1); Has 95929 Blast hits to 94304 proteins in 3994 species: Archae - 68; Bacteria - 9258; Metazoa - 35333; Fungi - 7079; Plants - 31104; Viruses - 229; Other Eukaryotes - 12858 (source: NCBI BLink). | ||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:25303439..25305857 | ||||||||||||
| Molecular Weight (calculated) | 66565.30 Da | ||||||||||||
| IEP (calculated) | 7.10 | ||||||||||||
| GRAVY (calculated) | -0.33 | ||||||||||||
| Length | 587 amino acids | ||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MCSNGIFVSL LTLSLLLGKS CSETDTLHQG QFLKDGQELV SAFKIFKLKF FNFKNSENLY LGIWFNNLYL NTDSQDRPVW IANRNNPISD RSGSLTVDSL 101: GRLKILRGAS TMLELSSIET TRNTTLQLLD SGNLQLQEMD ADGSMKRVLW QSFDYPTDTL LPGMKLGFDG KTRKRWELTS WLGDTLPASG SFVFGMDTNI 201: TNVLTILWRG NMYWSSGLWN KGRFSEEELN ECGFLFSFVS TKSGQYFMYS GDQDDARTFF PTIMIDEQGI LRREQMHRQR NRQNYRNRNC LAAGYVVRDE 301: PYGFTSFRVT VSSSASNGFV LSGTFSSVDC SAICLQNSSC LAYASTEPDG TGCEIWNTYP TNKGSASHSP RTIYIRGNDQ EMLLRELGID RSCIHKRNER 401: KSNNELQIFS FESVVSATDD FSDENKLGEG GFGPVYKGKL LNGEEVAIKR LSLASGQGLV EFKNEAILIA KLQHTNLVQV LGCCIEKDEK MLIYEYMQNK 501: SLDYFLFDPL RKNVLDWTLR FRIMEGIIQG LLYLHKYSRL KVIHRDIKAS NILLDEDMNP KISDFGLARI FGAEETRANT KRVAGTL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)