AT1G61100.2
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : disease resistance protein (TIR class), putative | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||
| Computational Description (TAIR10) |
disease resistance protein (TIR class), putative; INVOLVED IN: defense response; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: COP1-interacting protein 7 (TAIR:AT4G27430.2). | ||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||
| Coordinates (TAIR10) | chr1:-:22508831..22512122 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 89633.80 Da | ||||||||||||||||||||||||
| IEP (calculated) | 6.12 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.88 | ||||||||||||||||||||||||
| Length | 807 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDSRAILDSA LFQLTPTRTR FDLVLFCGSK KEKLASGIFE PFVSHLKFAR DQISKGGYSI SLTPPSSHSS WFTKSTFDRF VRFVNTPAII ERFATLEKEI 101: LQIENSIQAN EIANAADALQ LQDGSNSGDS SNLKKSNESS KESENGNEVV GEETSKIQLQ RLLETRRTLL RREQAMAYAR GVVAGYEIDS IDDLILFADA 201: FGASRLREAC IMYKELWKKK HGDGLWMAEL AAVKACAPVD MSLLGSSGII LTNEGAALSL NGTDSMPSNT DDKSVNLEQH PSGVPNFQAP MGWPNHMPQY 301: FYPSPYQGYP YPPMQHMPNQ NQGNMPWPSR GKTSKKKGKG DSDGDESSES SESSESESAS DDSASSLEDQ GKRHSRTSKN SRRSKKNRKK SSKTVIIRNI 401: NYITPEGRNG DMEGNEFTDN GSIKETVDAA VGMLNEKRAH EGEVSGEEKR SNENWDSFQN ILMRHDDGSD VHSMDVIGQE HFTHRGASVG ANSNGLQTKN 501: TASGDSIITT HKYIEDGGDS FDHFESEDSA RRLPRTRDST EECMLLLKRS EMLGDESKDM YNATRGESLV KKSGSGEDWF TASGNRAGKP EINYGRMSFD 601: DSILTSQGSD KSKKQEFVDD SFMVHSSSLA ADDLYDSRWR PDMAADIVLA SDVDNGHANE KHDSWEPNDL CMIPERNSGD SLANDYSIDF SAEANARLSS 701: NGTAQEKEDK SGEKKNNVKN PETRKSKTPS RTRAETMSKT AKKPTVASRT MAQKNKFEKE EEMRKRIENL VMERQKRIAE RSAMTASRKV SLDKGSSRAP 801: LVRERAT |
||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)