AT1G53710.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.968 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Calcineurin-like metallo-phosphoesterase superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Calcineurin-like metallo-phosphoesterase superfamily protein; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843); Has 733 Blast hits to 717 proteins in 171 species: Archae - 5; Bacteria - 24; Metazoa - 239; Fungi - 230; Plants - 210; Viruses - 0; Other Eukaryotes - 25 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:20053662..20056271 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 51169.30 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.22 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.23 | ||||||||||||||||||||||||||||||||||||
| Length | 448 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKHHHKLTVA LCLIWAATIL YGEMFAFWVP SLFTCSWPHH KSDGVESDGN FTKVAIVTDP QLMDKTSFRL SSKTLALELA QFYTDINMRR SFFRSVLPFK 101: PDVVLFLGDY FDGGPFLSEE EWQESLNRLK HVFGLNSEGR VGDIPTFYIP GNHDIGYSRV ASHKQGVVID RYEKVFGVRN RRFMIGNVEF ISIDAQAIDG 201: NSKKDLASEV WKFVQNVSTD AQSHPRVLLT HIPLYRPDQT PCGPHRGSSV IDQRFWRHSQ DQEVIYQNYI TPESSTKLLE LIKPILVLSG HDHDQCTVIH 301: KSKAGSVTEH TLGTVSWQQG NIHPSFMLLS VPKAFHRNSS DPDKMLHTQL CFLPSQLFIY MWYLSLFVMS LLALLLWPNH GISFLNNAAD CISNVMKSSF 401: LSSVTKEKNE DENCEYEMVW DAEGSMHLVK KALQTPVKRQ SDKPLVEK |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)