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AT1G44130.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
extracellular 1.000
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Eukaryotic aspartyl protease family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Eukaryotic aspartyl protease family protein; FUNCTIONS IN: aspartic-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: plant-type cell wall; EXPRESSED IN: stem, embryo, pedicel, stamen; EXPRESSED DURING: 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Peptidase aspartic (InterPro:IPR021109), Peptidase aspartic, catalytic (InterPro:IPR009007), Peptidase A1 (InterPro:IPR001461), Peptidase aspartic, active site (InterPro:IPR001969); BEST Arabidopsis thaliana protein match is: Eukaryotic aspartyl protease family protein (TAIR:AT1G77480.2); Has 1835 Blast hits to 1829 proteins in 127 species: Archae - 0; Bacteria - 0; Metazoa - 38; Fungi - 37; Plants - 1697; Viruses - 0; Other Eukaryotes - 63 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XNV7eggNOG:KOG1339EMBL:AC074228EMBL:CP002684EnsemblPlants:AT1G44130EnsemblPlants:AT1G44130.1entrez:841016
Gene3D:2.40.70.10GeneID:841016GO:GO:0004190GO:GO:0005794GO:GO:0009505Gramene:AT1G44130.1hmmpanther:PTHR13683
hmmpanther:PTHR13683:SF316HOGENOM:HOG000241781InterPro:IPR001461InterPro:IPR001969InterPro:IPR021109InterPro:IPR032799InterPro:IPR032861
InterPro:IPR033121KEGG:ath:AT1G44130MEROPS:A01.A24OMA:QSYPSAHPANTHER:PTHR13683Pfam:PF14541Pfam:PF14543
Pfscan:PS51767PhylomeDB:Q9C6Y5PIR:F96505PRINTS:PR00792PROSITE:PS00141PROSITE:PS51767Proteomes:UP000006548
RefSeq:NP_175079.1scanprosite:PS00141SMR:Q9C6Y5STRING:3702.AT1G44130.1SUPFAM:SSF50630TAIR:AT1G44130UniGene:At.52031
UniProt:Q9C6Y5
Coordinates (TAIR10) chr1:-:16787508..16789318
Molecular Weight (calculated) 43962.40 Da
IEP (calculated) 8.74
GRAVY (calculated) 0.03
Length 405 amino acids
Sequence (TAIR10)
(BLAST)
001: MISRFSLLLF LFLVIVPLSK SSIFKTFIKS SPSSVVFPLS GNVFPLGYYS VLMQIGSPPK AFQFDIDTGS DLTWVQCDAP CSGCTLPPNL QYKPKGNIIP
101: CSNPICTALH WPNKPHCPNP QEQCDYEVKY ADQGSSMGAL VTDQFPLKLV NGSFMQPPVA FGCGYDQSYP SAHPPPATAG VLGLGRGKIG LLTQLVSAGL
201: TRNVVGHCLS SKGGGFLFFG DNLVPSIGVA WTPLLSQDNH YTTGPADLLF NGKPTGLKGL KLIFDTGSSY TYFNSKAYQT IINLIGNDLK VSPLKVAKED
301: KTLPICWKGA KPFKSVLEVK NFFKTITINF TNGRRNTQLY LAPELYLIVS KTGNVCLGLL NGSEVGLQNS NVIGDISMQG LMMIYDNEKQ QLGWVSSDCN
401: KLPKT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)