AT1G07200.2
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.962 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: ATP binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (TAIR:AT2G29970.1); Has 14612 Blast hits to 14412 proteins in 2715 species: Archae - 17; Bacteria - 11575; Metazoa - 78; Fungi - 306; Plants - 572; Viruses - 0; Other Eukaryotes - 2064 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:2209033..2212316 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 107812.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.98 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.29 | ||||||||||||||||||||||||||||||||||||
| Length | 979 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPTPVTTARE CLTEEAARAL DDAVVVARRR SHAQTTSLHA VSALLAMPSS ILREVCVSRA ARSVPYSSRL QFRALELCVG VSLDRLPSSK SPATEEDPPV 101: SNSLMAAIKR SQANQRRHPE SYHLQQIHAS NNGGGGCQTT VLKVELKYFI LSILDDPIVN RVFGEAGFRS SEIKLDVLHP PVTQLSSRFS RGRCPPLFLC 201: NLPNSDPNRE FPFSGSSGFD ENSRRIGEVL GRKDKKNPLL IGNCANEALK TFTDSINSGK LGFLQMDISG LSLISIEKEI SEILADGSKN EEEIRMKVDD 301: LGRTVEQSGS KSGIVLNLGE LKVLTSEANA ALEILVSKLS DLLKHESKQL SFIGCVSSNE TYTKLIDRFP TIEKDWDLHV LPITASTKPS TQGVYPKSSL 401: MGSFVPFGGF FSSTSNFRVP LSSTVNQTLS RCHLCNEKYL QEVAAVLKAG SSLSLADKCS EKLAPWLRAI ETKEDKGITG SSKALDDANT SASQTAALQK 501: KWDNICQSIH HTPAFPKLGF QSVSPQFPVQ TEKSVRTPTS YLETPKLLNP PISKPKPMED LTASVTNRTV SLPLSCVTTD FGLGVIYASK NQESKTTREK 601: PMLVTLNSSL EHTYQKDFKS LREILSRKVA WQTEAVNAIS QIICGCKTDS TRRNQASGIW LALLGPDKVG KKKVAMTLSE VFFGGKVNYI CVDFGAEHCS 701: LDDKFRGKTV VDYVTGELSR KPHSVVLLEN VEKAEFPDQM RLSEAVSTGK IRDLHGRVIS MKNVIVVVTS GIAKDNATDH VIKPVKFPEE QVLSARSWKL 801: QIKLGDATKF GVNKRKYELE TAQRAVKVQR SYLDLNLPVN ETEFSPDHEA EDRDAWFDEF IEKVDGKVTF KPVDFDELAK NIQEKIGSHF ERCFGSETHL 901: ELDKEVILQI LAASWSSLSS GEEEGRTIVD QWMQTVLARS FAEAKQKYGS NPMLGVKLVA SSSGLASGVE LPAKVDVIW |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)