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AT5G58110.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : chaperone binding;ATPase activators
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
chaperone binding;ATPase activators; FUNCTIONS IN: ATPase activator activity, chaperone binding; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Activator of Hsp90 ATPase, N-terminal (InterPro:IPR015310); Has 297 Blast hits to 292 proteins in 99 species: Archae - 0; Bacteria - 0; Metazoa - 161; Fungi - 2; Plants - 78; Viruses - 0; Other Eukaryotes - 56 (source: NCBI BLink).
Protein Annotations
eggNOG:COG5580eggNOG:KOG2936EMBL:AB024029EMBL:AF462824
EMBL:AY098968EMBL:CP002688EnsemblPlants:AT5G58110EnsemblPlants:AT5G58110.1
entrez:835923GeneID:835923GO:GO:0001671Gramene:AT5G58110.1
hmmpanther:PTHR13009hmmpanther:PTHR13009:SF5HOGENOM:HOG000265247InterPro:IPR015310
KEGG:ath:AT5G58110OMA:CSGDAFQPfam:PF09229PhylomeDB:Q9FGT3
Proteomes:UP000006548RefSeq:NP_200619.1SMART:SM01000STRING:3702.AT5G58110.1
SUPFAM:0044510SUPFAM:SSF103111TAIR:AT5G58110UniGene:At.28648
UniProt:Q9FGT3
Coordinates (TAIR10) chr5:+:23515275..23516479
Molecular Weight (calculated) 22436.60 Da
IEP (calculated) 4.94
GRAVY (calculated) -0.68
Length 196 amino acids
Sequence (TAIR10)
(BLAST)
001: MEREEEKTKE GSSYRYWVRE ATSDAAPPPL PQKLSNNDVS LNTAPASLGS LWNRAGTWEE KSLTKWATDR LKELLGSVGS LQFSSGKAEI IDVNRCVGDA
101: FLVTVRNKKR VGYTYELSLK VEGEWSFEEN MKKVKGSLEI PEFSFGELDD LEVDVKLSED KELSQQLKQR IKLDMKQFLE PIRLKLGLFE QELKDR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)