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AT4G22320.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G55210.1); Has 8953 Blast hits to 5363 proteins in 542 species: Archae - 33; Bacteria - 806; Metazoa - 2454; Fungi - 831; Plants - 279; Viruses - 151; Other Eukaryotes - 4399 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J06HeggNOG:ENOG410YSMZEMBL:AK117590EMBL:BT005180
EMBL:CP002687EnsemblPlants:AT4G22320EnsemblPlants:AT4G22320.1entrez:828327
ExpressionAtlas:Q8GYJ0GeneID:828327Gramene:AT4G22320.1hmmpanther:PTHR34572
HOGENOM:HOG000242734ncoils:CoilOMA:DGKSESNPhylomeDB:Q8GYJ0
Proteomes:UP000006548RefSeq:NP_193963.2TAIR:AT4G22320UniGene:At.32549
UniProt:Q8GYJ0
Coordinates (TAIR10) chr4:-:11793129..11794596
Molecular Weight (calculated) 26285.60 Da
IEP (calculated) 4.13
GRAVY (calculated) -1.14
Length 238 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGVGARLGR SSTRYGPATV FTGPVRKWKK KWVHVSPSSK KDNNNSSSGS AAAAASVVNG GSNSDGSNGS HLLLYKWAPL SQNGNGNEDG KSESNSPSED
101: TVATVAEDPP RRRFKYVPIA VLEEQKKEIT EIEEDDKIEE DDKIDEDNKV EQEDKVDEDK TVEESSEKKA EVEVEEKPDI NDVPMEDIQQ VEEKIVQDDE
201: EKVVRQDLNE STVDLGLNLN ANDADAENDP KEDKPLEE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)