AT3G20480.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.995 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : tetraacyldisaccharide 4'-kinase family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
tetraacyldisaccharide 4'-kinase family protein; FUNCTIONS IN: tetraacyldisaccharide 4'-kinase activity, ATP binding; INVOLVED IN: lipid A biosynthetic process; LOCATED IN: membrane; EXPRESSED IN: sepal, root, flower, seed; EXPRESSED DURING: petal differentiation and expansion stage, E expanded cotyledon stage; CONTAINS InterPro DOMAIN/s: Tetraacyldisaccharide 4'-kinase (InterPro:IPR003758); Has 4415 Blast hits to 4415 proteins in 1307 species: Archae - 0; Bacteria - 2721; Metazoa - 2; Fungi - 0; Plants - 24; Viruses - 0; Other Eukaryotes - 1668 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:7151497..7153369 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 44201.80 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.88 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.00 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 395 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEKLRKVVNE IAYTRVHTNS PALHRSLVPF LTIASSLYGV ALQIRRSLYR YSLLQKHRLP VPVISVGNLS WGGNGKTPMV EYISQFLVDS GLTPLILTRG 101: YAGGDEVKML ERHLRGGPVK IGVGANRAAT AALFLDKYGC VDSSSLRSFF DLHERAQVWT ISEKIGCIIL DDGMQHWSLS RDLEIVMLNG LNPWGNGHLM 201: PHGPLREPLL ALERADVAVV HHVDLITKQS LRDIENMIQG FKKSIPIFYS KMVPKYLFDV KNARSHVALE ALRCASVLCV SAIGSADAFV KSIEMTGAHY 301: VDRLDFSDHH LFEAEDVETM SRRAKGLEHK SNCKPIIVVT EKDYDRDPEI LKCLDSYTVL VLCSELQITP ILETDVDSFN YTLMKALAAK FYVSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)