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AT2G43160.1
Subcellular Consensus
(Prediction and Experimental)

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SUBAcon:
plasma membrane 0.789
What is SUBAcon?
What is ASURE?
SUBAcon computations
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ENTH/VHS family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ENTH/VHS family protein; FUNCTIONS IN: binding; LOCATED IN: plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Epsin, N-terminal (InterPro:IPR001026), Epsin-like, N-terminal (InterPro:IPR013809), ENTH/VHS (InterPro:IPR008942); BEST Arabidopsis thaliana protein match is: ENTH/VHS family protein (TAIR:AT3G59290.1); Has 18929 Blast hits to 13912 proteins in 880 species: Archae - 58; Bacteria - 1548; Metazoa - 8281; Fungi - 4113; Plants - 1702; Viruses - 130; Other Eukaryotes - 3097 (source: NCBI BLink).
Protein Annotations
BioGrid:4255eggNOG:ENOG410XSM0eggNOG:KOG2056EMBL:AC004450EMBL:AK176395EMBL:AK176406EMBL:AK176479
EMBL:AK220792EMBL:AK221258EMBL:AK221259EMBL:AK229845EMBL:AK230277EMBL:AY050457EMBL:BT002247
EMBL:CP002685EnsemblPlants:AT2G43160EnsemblPlants:AT2G43160.1EnsemblPlants:AT2G43160.2EnsemblPlants:AT2G43160.3entrez:818918Gene3D:1.25.40.90
GeneID:818918Genevisible:Q67YI9GO:GO:0005543GO:GO:0005774GO:GO:0005794GO:GO:0005886GO:GO:0015031
GO:GO:0030136GO:GO:0030276hmmpanther:PTHR12276HOGENOM:HOG000239600InParanoid:Q67YI9InterPro:IPR008942InterPro:IPR013809
iPTMnet:Q67YI9KEGG:ath:AT2G43160KO:K12471OMA:FETNSFVPaxDb:Q67YI9Pfam:PF01417Pfam:Q67YI9
Pfscan:PS50942PhylomeDB:Q67YI9PIR:G84862PIR:H84862PRIDE:Q67YI9PRO:PR:Q67YI9PROSITE:PS50942
ProteinModelPortal:Q67YI9Proteomes:UP000006548RefSeq:NP_001031535.1RefSeq:NP_850386.1RefSeq:NP_850387.1RefSeq:NP_973675.1SMART:SM00273
SMR:Q67YI9STRING:3702.AT2G43160.1SUPFAM:SSF48464TAIR:AT2G43160UniGene:At.21654UniGene:At.69837UniProt:Q67YI9
Coordinates (TAIR10) chr2:+:17948884..17953267
Molecular Weight (calculated) 95483.00 Da
IEP (calculated) 5.78
GRAVY (calculated) -0.82
Length 895 amino acids
Sequence (TAIR10)
(BLAST)
001: MKKVFGQTVR DLKREVNKKV LKVPGVEQKV LDATSNEPWG PHGSLLADLA QASRNYHEYQ LIMVVIWKRL SDTGKNWRHV YKALTVLEYM VGHGSERVID
101: EIRERAYQIS TLSDFQYIDS GGRDQGSNVR KKSQSLVALV NDKERIAEVR QKAAANRDKY RSSAPGGMYK PSGGYGDKYD YGSRDEERSS YGREREYGYR
201: DDDRNSRDGD RHSRDSEDRY GRDGNRDDDY RGRSRSVDNY GSRGRSSERE REDDGHSSSR GSGARADDNS QDGRGGLQRK FSEQNIGAPP SYEEAVSDSR
301: SPVYSERDGG ETPQVTAPGA ASPPPPQVAA PEAASPPTGT NTANTTATFV NESPSQKVET FDEFDPRSAF SAGPPAYAST DGVTAPPTVT SMSAPTTSNS
401: VEMDLLGSLA DVFSSNALAI VPADSIYVET NGQANAGPAP SFSTSQPSTQ SFDDPFGDSP FKAFTSTDTD STPQQNFGAS FQPPPPAFTS EVSHPDTAHN
501: FGFGDSFSAV ANPDPASQNV QPPSNSPGFP QEQFATSQSG IDILAGILPP SGPPVQSGPS IPTSQFPPSG NNMYEGFHSQ PPVSTAPNLP GQTPFGQAVQ
601: PYNMVPHSQN MTGAMPFNSG GFMHQPGSQT PYSTPSGPAG QFMAHQGHGM PPSHGPQRTQ SGPVTLQGNN NVMGDMFSQA TPNSLTSSSS HPDLTPLTGA
701: IEIVPPPQKK FEPKSSVWAD TLSRGLVNFN ISGSKTNPLA DIGVDFEAIN RREKRLEKQT NTPATSTINM GKAMGSGTGL GRSGATAMRP PPNPMTGSGM
801: PMGGGMGVGS YGGMNQNQPM GMGMGAGMNQ NQPMGMGMGP GMNMNMNMGG YGQGYPMQPQ NPGMVPSPNM PGNNYNPMMG QGGYNPQQSY GGGYR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)