AT2G20290.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:endoplasmic reticulum 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : myosin-like protein XIG | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
member of Myosin-like proteins | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
myosin-like protein XIG (XIG); FUNCTIONS IN: motor activity; INVOLVED IN: actin filament-based movement; LOCATED IN: endomembrane system, myosin complex; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Dil domain (InterPro:IPR018444), Dilute (InterPro:IPR002710), Myosin, N-terminal, SH3-like (InterPro:IPR004009), Myosin head, motor domain (InterPro:IPR001609), IQ calmodulin-binding region (InterPro:IPR000048); BEST Arabidopsis thaliana protein match is: Myosin family protein with Dil domain (TAIR:AT4G28710.1); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:8743275..8751878 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 169082.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.46 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.34 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1493 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MVFKVFSFVA FMACSTVKVG SIVWVQDPEE AWIDGEVVEV NGEDIKVQCT SGKTVVAKGS NTYPKDMEVP PSGVDDMTTL AYLHEPGVLQ NLKSRYYIDE 0101: IYTYTGNILI AVNPFKQLPN LYNDHMMAQY KGAALGELSP HPFAVADAAY RQMINEGISQ SILVSGESGA GKTETAKMLM KYLAKMGGRA VSDRRTVEDQ 0201: VLESNPVLEA FGNAKTVKNN NSSRFGKFVE IQFDQRGRIS GAAIRTYLLE RSRVCQVSDP ERNYHCFYML CAAPPEDKRK LKLNDPTEFR YLNQSHCIKL 0301: DGVDDSKEYT KTREAMGIVG INLEEQEAIF RVVAAILHLG NIEFAIGEEP DSSVPTDESK KYLKIAAELF MCDEQALEDS LCKRIMVTPE ETISRCLDPN 0401: SAALSRDALA KFVYSRLFDW IVNKINNSIG QDPDSKDMIG VLDIYGFESF KTNSFEQFCI NLTNEKLQQH FTQHVLKMEQ EEYTKEEIEW SQITFPDNRY 0501: VLELIEKKRG GIIALLDEAC MFPRSTHKTF SQKLYETLKD NKYFSKPKLS RTDFTICHYA GDVTYQTEQF LEKNKDYVVA EHQALLGASR CTFIAGLFPP 0601: LVEDANKQSK FSSIASQFKQ QLASLIEGLN TTEPHYIRCV KPNNLLKPSI FENQNSLQQL RCGGVMETIR VCRAGYPTRK HFDEFLDRFG ILDSATLDKS 0701: SDEKAACKKL LETVGLNGFQ IGKTKVFLKA GQMAELDDRR TEVLGRAACI IQWKFRSYLT RQSFIMLRNA AINIQAVYRG QVARYRFENL RREAAALKIQ 0801: RALRIHLDRK RSYIEAVVTV QSGLRGMAAR VVLRRKTKAT TVIQSHCRRL RAELHYKKLK KAAITTQSAW RARLARKELR KLKTDARDTV VLQAAKSMLA 0901: EKVEELTWRL DLEKRMRVDM EVSKAQENAK LQLALEEIQL QFEETKVSLL KEVEAAKKTA AIVPVVKEVP VVDTVLMEKL TSENEKLKSL VTSLELKIDE 1001: TEKKFEETKK ISEERLKKAL DAENKIDNLK TAMHNLEEKL KEVKLENNFL KESVLTTPVK TASGRFLSTP LKNLQNGLFT SEESQLSGAE FTTPPRIQES 1101: GSDTKSRGSH IDPQHEDVDA LINSVTKNVG FSQGKPVAAF TIYKCLLHWK SFEAERTNVF DRLVQMIGSA IKDEDNDANL AYWLSNTSTL LFMLQQSLKS 1201: GGTGATPLRQ SPSLVRWMTK GFRSPAAEAI RPVDAKDPAL HFKQQLEAYV EKILGIIWDN LKKELNTVLA LCIQAPKTFK GNALISITTA NYWQDIIEGL 1301: DALLSTLKES FVPPVLIQKI FSQAFSLINV QVCNSLVTRP DNCSFINGEY LKSGLEKLEK WCCETKEEYA GSSWDELKHT RQAVGFLLIH KKYNISYDEI 1401: ANDLCPNLQI QQHFKLCTLY KDEIYNTKSV SQDVIASMTG VMTDSSDFLL KEDSSNIISL SIDDLCSSMQ DKDFAQVKPA EELLENPSFI FLH |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)