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AT2G02390.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.984
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31186290 (2019): cytosol None
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:22550958 (2012): plastid
  • PMID:21166475 (2011): cytosol
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glutathione S-transferase zeta 1
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the zeta class of GSTs. Naming convention according to Wagner et al. (2002). The protein undergoes spontaneous thiolation following treatment with the oxidant tert-butylhydroperoxide.
Computational
Description (TAIR10)
glutathione S-transferase zeta 1 (GSTZ1); FUNCTIONS IN: glutathione transferase activity, catalytic activity; INVOLVED IN: toxin catabolic process; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Maleylacetoacetate isomerase (InterPro:IPR005955), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase (class zeta) 2 (TAIR:AT2G02380.1); Has 17196 Blast hits to 17170 proteins in 1512 species: Archae - 0; Bacteria - 9185; Metazoa - 2216; Fungi - 532; Plants - 2070; Viruses - 0; Other Eukaryotes - 3193 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G02390-MONOMERBioCyc:ARA:GQT-1345-MONOMERBioCyc:ARA:GQT-1346-MONOMERBRENDA:5.2.1.2
EC:2.5.1.18EC:5.2.1.-eggNOG:COG0625eggNOG:KOG0868
EMBL:AC005312EMBL:AF288182EMBL:AJ278293EMBL:AK226342
EMBL:AY052332EMBL:AY061901EMBL:AY208155EMBL:CP002685
EnsemblPlants:AT2G02390EnsemblPlants:AT2G02390.1entrez:814770EvolutionaryTrace:Q9ZVQ3
ExpressionAtlas:Q9ZVQ3Gene3D:1.20.1050.10Gene3D:3.40.30.10GeneID:814770
Genevisible:Q9ZVQ3GO:GO:0004364GO:GO:0004601GO:GO:0005737
GO:GO:0005829GO:GO:0006749GO:GO:0009072GO:GO:0009407
GO:GO:0016034GO:GO:0016853GO:GO:1902000hmmpanther:PTHR11260
hmmpanther:PTHR11260:SF293HOGENOM:HOG000125758InParanoid:Q9ZVQ3InterPro:IPR004045
InterPro:IPR004046InterPro:IPR005955InterPro:IPR010987InterPro:IPR012336
KEGG:ath:AT2G02390KO:K01800OMA:RAQVRMIPaxDb:Q9ZVQ3
PDB:1E6BPDBsum:1E6BPfam:PF13409Pfam:PF13417
Pfam:PF14497Pfam:Q9ZVQ3Pfscan:PS50404Pfscan:PS50405
PhylomeDB:Q9ZVQ3PIR:B84436PRIDE:Q9ZVQ3PRO:PR:Q9ZVQ3
PROSITE:PS50404PROSITE:PS50405ProteinModelPortal:Q9ZVQ3Proteomes:UP000006548
Reactome:R-ATH-156590Reactome:R-ATH-71182RefSeq:NP_178344.1RefSeq:NP_973400.1
SMR:Q9ZVQ3STRING:3702.AT2G02390.3SUPFAM:SSF47616SUPFAM:SSF52833
TAIR:AT2G02390tair10-symbols:ATGSTZ1tair10-symbols:GST18tair10-symbols:GSTZ1
TIGRfam:TIGR01262TIGRFAMs:TIGR01262UniGene:At.10192UniProt:Q9ZVQ3
Coordinates (TAIR10) chr2:+:629015..630955
Molecular Weight (calculated) 24888.90 Da
IEP (calculated) 5.65
GRAVY (calculated) -0.22
Length 221 amino acids
Sequence (TAIR10)
(BLAST)
001: MANSGEEKLK LYSYWRSSCA HRVRIALALK GLDYEYIPVN LLKGDQFDSD FKKINPMGTV PALVDGDVVI NDSFAIIMYL DEKYPEPPLL PRDLHKRAVN
101: YQAMSIVLSG IQPHQNLAVI RYIEEKINVE EKTAWVNNAI TKGFTALEKL LVNCAGKHAT GDEIYLADLF LAPQIHGAIN RFQINMEPYP TLAKCYESYN
201: ELPAFQNALP EKQPDAPSST I
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)