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AT1G79660.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.755
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G16170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J4DTeggNOG:ENOG410YWEUEMBL:AC010793EMBL:AY052243
EMBL:AY060515EMBL:CP002684EnsemblPlants:AT1G79660EnsemblPlants:AT1G79660.1
entrez:844305GeneID:844305GO:GO:0016021Gramene:AT1G79660.1
hmmpanther:PTHR34774hmmpanther:PTHR34774:SF1HOGENOM:HOG000077700KEGG:ath:AT1G79660
OMA:CHVELAKPhylomeDB:Q9MA09ProMEX:Q9MA09Proteomes:UP000006548
RefSeq:NP_565217.1TAIR:AT1G79660TMHMM:TMhelixUniGene:At.34070
UniGene:At.68567UniProt:Q9MA09
Coordinates (TAIR10) chr1:+:29976294..29976575
Molecular Weight (calculated) 10479.10 Da
IEP (calculated) 9.81
GRAVY (calculated) 0.31
Length 93 amino acids
Sequence (TAIR10)
(BLAST)
1: MVLDGIVSSP LRRPHALKKQ WDDLGSCSTV VQRHRFLLTA MLLLAFLCTI YIYFAVTLGA RHLLCSGMTG KDKAMCQMEH IQASFSNGKL KFF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)