AT1G70090.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.991 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : glucosyl transferase family 8 | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a protein with putative galacturonosyltransferase activity. | ||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
glucosyl transferase family 8 (LGT8); FUNCTIONS IN: transferase activity, transferring hexosyl groups, polygalacturonate 4-alpha-galacturonosyltransferase activity, transferase activity, transferring glycosyl groups; INVOLVED IN: carbohydrate biosynthetic process; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Glycosyl transferase, family 8 (InterPro:IPR002495); BEST Arabidopsis thaliana protein match is: Nucleotide-diphospho-sugar transferases superfamily protein (TAIR:AT1G24170.1); Has 2070 Blast hits to 2058 proteins in 476 species: Archae - 0; Bacteria - 1035; Metazoa - 229; Fungi - 4; Plants - 727; Viruses - 0; Other Eukaryotes - 75 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:26400927..26402099 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 44261.10 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.54 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||||||||||
| Length | 390 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRLRFPMKSA VLAFAIFLVF IPLFSVGIRM IPGRLTAVSA TVGNGFDLGS FVEAPEYRNG KECVSQSLNR ENFVSSCDAS LVHVAMTLDS EYLRGSIAAV 101: HSMLRHASCP ENVFFHLIAA EFDPASPRVL SQLVRSTFPS LNFKVYIFRE DTVINLISSS IRQALENPLN YARNYLGDIL DPCVDRVIYL DSDIIVVDDI 201: TKLWNTSLTG SRIIGAPEYC HANFTKYFTS GFWSDPALPG FFSGRKPCYF NTGVMVMDLV RWREGNYREK LETWMQIQKK KRIYDLGSLP PFLLVFAGNV 301: EAIDHRWNQH GLGGDNVRGS CRSLHKGPVS LLHWSGKGKP WVRLDEKRPC PLDHLWEPYD LYEHKIERAK DQSLFGFSSL SELTEDSSFF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)