AT1G48120.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : hydrolases;protein serine/threonine phosphatases | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
hydrolases;protein serine/threonine phosphatases; FUNCTIONS IN: hydrolase activity, protein serine/threonine phosphatase activity; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Metallophosphoesterase (InterPro:IPR004843), Aminotransferase-like, plant mobile domain (InterPro:IPR019557), Serine/threonine-specific protein phosphatase/bis(5-nucleosyl)-tetraphosphatase (InterPro:IPR006186); BEST Arabidopsis thaliana protein match is: serine/threonine phosphatase 7 (TAIR:AT5G63870.1); Has 7651 Blast hits to 7316 proteins in 444 species: Archae - 82; Bacteria - 281; Metazoa - 2438; Fungi - 1339; Plants - 1824; Viruses - 2; Other Eukaryotes - 1685 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:17774238..17779624 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 149462.00 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.80 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.45 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 1340 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MEVQSLLNFD LDPGPVDQSI LVWQHEHRSA AIWEDEVPPR ELTCRHKLLG MRDWPLDPLV CQKLIEFGLY GVYKVAFIQL DYALITALVE RWRPETHTFH 0101: LPAGEITVTL QDVNILLGLR VDGPAVTGST KYNWADLCED LLGHRPGPKD LHGSHVSLAW LRENFRNLPA DPDEVTLKCH TRAFVLALMS GFLYGDKSKH 0201: DVALTFLPLL RDFDEVAKLS WGSATLALLY RELCRASKRT VSTICGPLVL LQLWAWERLH VGRPGRLKDV GASYMDGIDG PLPDPLGCRW RASLSHKENP 0301: RGGLDFYRDQ FDQQKDEQVI WQPYTPDLLA KIPLICVSGE NIWRTVAPLI CFDVVEWHRP DRVLRQFGLH QTIPAPCDNE KALHAIDKRG KSEYDWSARH 0401: SRHIGLWEAR VSSVVSGEPE CSPMDYNDPY MEWYRRITRR IISPMNERRP GQFLPTGFAF QVLVQRVAAI HARSRASLEE ELTVGSARQT LQDIVDMCAG 0501: ALQLNAPLGS LSNGSVAQAP TPEPFLMLPQ PTPTIIPQKP MGGEMVCLPL NDMEIDDGLA AEPLELMPPV QDIGCEQSLS SVSQKPLFWP SGGKLTFSWV 0601: CEVMLVFDWS SKNLPPCEFS SVLPFNVLDE LVLFASKILK KEPNCVRIDS EKAEVVVVGD LHGQLHDLLY LMQDAGFPDG DRFYVFNGNY VDIGAWGLET 0701: FLLLLSWKVL LPARVYLLRG SHESESCTSM YGFKNEVLTK YGDKGAAVYK KCLECFQLLP LASVIAGKVY TAHGGLFRDV SSFLSDKQER NRKRKRTQKK 0801: QTDNTVLDTE DRSESLPLGS LKDLSKVKRR VIDPPTEGSN LIPGDILWSD PSKDTGLFLN KERGIGLLWG PDCTAKFLQD NNLKWIIRGK GAPDERAKRD 0901: DLAPMNGGYA EDHEGLITLF SAPDHPQFQD TEERHNNKAA YIILQIPECE ELKFQPLEAV SPRPKAEAYY DFRRLIHPPS NLVHNITNSV DSPSSVPDDK 1001: DNLISSENVE YKSMDLSEQM EVDEKDDVDS KYSESITDEV AAFGTPASGD RDMVDFSDKT ENGSKEADHS ETAEISKDLS DTVGKPESCS RTRGTYEAIG 1101: TDAKLKSNTP EAINLEPQPG CDLYVPDSGN STESRTEKAA EEACVGRISI DDCSTTGDAA VELEITYDEK LDRVVTEITG NDAAECMTDG NRDIATDGAE 1201: NLEPSTSKLN YSEPSEDIDD STMKFRHNTS CVADSDLETV NGGVNADCSS SSKCLTSKPV VAHDKFTNLT KPSHDKGYGE SADKPERVIK LVTYSKRKSS 1301: DKKHMIESNE DPQQKVNDSV DSKNKGSLDK SQSVPGDMDS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)