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AT1G14620.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : decoy
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DECOY (DECOY); CONTAINS InterPro DOMAIN/s: Ribosomal protein L46 (InterPro:IPR021757); Has 274 Blast hits to 274 proteins in 142 species: Archae - 0; Bacteria - 2; Metazoa - 83; Fungi - 120; Plants - 46; Viruses - 0; Other Eukaryotes - 23 (source: NCBI BLink).
Protein Annotations
DNASU:838024eggNOG:ENOG4111HSFeggNOG:KOG4548EMBL:AY127001
EMBL:BT001031EMBL:CP002684EnsemblPlants:AT1G14620EnsemblPlants:AT1G14620.1
entrez:838024ExpressionAtlas:Q8L7U3GeneID:838024GO:GO:0003735
GO:GO:0005739GO:GO:0005762Gramene:AT1G14620.1hmmpanther:PTHR13124
HOGENOM:HOG000006153IntAct:Q8L7U3OMA:HMVIQPTPfam:PF11788
PhylomeDB:Q8L7U3Proteomes:UP000006548RefSeq:NP_172914.1SMR:Q8L7U3
STRING:3702.AT1G14620.1SwissPalm:Q8L7U3TAIR:AT1G14620tair10-symbols:DECOY
UniGene:At.11695UniProt:Q8L7U3
Coordinates (TAIR10) chr1:-:5014948..5016501
Molecular Weight (calculated) 27141.60 Da
IEP (calculated) 8.81
GRAVY (calculated) -0.40
Length 233 amino acids
Sequence (TAIR10)
(BLAST)
001: MPRSSLRLLA KPLLESRRGF CTSSDKIVAS VLFERLRVVI PKPDPAVYAF QEFKFNWQQQ FRRRYPDEFL DIAKNRAKGE YQMDYVPAPR ITEADKNNDR
101: KSLYRALDKK LYLLIFGKPF GATSDKPVWH FPEKVYDSEP TLRKCAESAL KSVVGDLTHT YFVGNAPMAH MAIQPTEEMP DLPSYKRFFF KCSVVAASKY
201: DISNCEDFVW VTKDELLEFF PEQAEFFNKM IIS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)