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AT1G11360.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Adenine nucleotide alpha hydrolases-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Adenine nucleotide alpha hydrolases-like superfamily protein; INVOLVED IN: response to stress; LOCATED IN: cytosol, plasma membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: UspA (InterPro:IPR006016), Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), Universal stress protein A (InterPro:IPR006015); BEST Arabidopsis thaliana protein match is: Adenine nucleotide alpha hydrolases-like superfamily protein (TAIR:AT4G27320.1); Has 1309 Blast hits to 1305 proteins in 243 species: Archae - 8; Bacteria - 416; Metazoa - 122; Fungi - 38; Plants - 720; Viruses - 0; Other Eukaryotes - 5 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IKS1eggNOG:ENOG4111HXPEMBL:AK318805EMBL:CP002684
EnsemblPlants:AT1G11360EnsemblPlants:AT1G11360.1EnsemblPlants:AT1G11360.2EnsemblPlants:AT1G11360.3
EnsemblPlants:AT1G11360.4entrez:837678Gene3D:3.40.50.620GeneID:837678
GO:GO:0005829GO:GO:0005886GO:GO:0006950GO:GO:0016787
Gramene:AT1G11360.1Gramene:AT1G11360.2Gramene:AT1G11360.3Gramene:AT1G11360.4
hmmpanther:PTHR31966hmmpanther:PTHR31966:SF3HOGENOM:HOG000241527InterPro:IPR006015
InterPro:IPR006016InterPro:IPR014729KEGG:ath:AT1G11360OMA:DEYHDAS
Pfam:PF00582PhylomeDB:C0Z2J1PRINTS:PR01438Proteomes:UP000006548
RefSeq:NP_001154325.1RefSeq:NP_001184963.1RefSeq:NP_563888.2RefSeq:NP_849638.1
STRING:3702.AT1G11360.1SUPFAM:SSF52402TAIR:AT1G11360UniGene:At.27599
UniGene:At.70164UniProt:C0Z2J1
Coordinates (TAIR10) chr1:-:3822171..3822899
Molecular Weight (calculated) 26509.80 Da
IEP (calculated) 4.68
GRAVY (calculated) -0.61
Length 242 amino acids
Sequence (TAIR10)
(BLAST)
001: MTSPGKSPRS DRKSPTVVTV QPSSPRFPIS TPTAGAQRKI GIAVDLSDES AYAVQWAVQN YLRSGDAVVL LHVQPTSVLY GADWGAMDLS PQWDPNNEES
101: QRKLEDDFDI VTNKKASDVA QPLVEADIPF KIHIVKDHDM KERLCLEVER LGLSTLIMGS RGFGATKRSS KGRLGSVSDY SVHHCACPVV VVRFPDDKDG
201: EDEKSGDSGG ENLMDSDKLH TVPEVAEEEG DKDEYHDASD KQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)