AT5G66960.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Prolyl oligopeptidase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Prolyl oligopeptidase family protein; FUNCTIONS IN: serine-type peptidase activity, serine-type endopeptidase activity; INVOLVED IN: proteolysis; LOCATED IN: membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase S9, prolyl oligopeptidase, catalytic domain (InterPro:IPR001375), Peptidase S9A, oligopeptidase, N-terminal beta-propeller (InterPro:IPR004106), Peptidase S9A, prolyl oligopeptidase (InterPro:IPR002470); BEST Arabidopsis thaliana protein match is: Prolyl oligopeptidase family protein (TAIR:AT1G69020.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:26736209..26739493 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 91005.90 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.67 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.47 | ||||||||||||||||||||||||||||||||||||||||
| Length | 792 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MLSNLSRTFS RHNCRFRRQQ CRCYKPPKSP PPPPPPPALP KPPKKPQSFT FHDATWEDPY SWMSKLEDKV AMRHMDIYME QEEKYTEAVL ADTDRIQTKL 101: QSEMASRLSF ELSTPPLRWG PWLYYRRVEE GKQYPVLCRR LASLHEEFIS HKSPAAGFDY TSGKRIEQKL LDYNQEAERF GGYAYEEMSE ISPDHKFLAY 201: TMYDKDNDYF KLCVRNLNSG ALCSKPHADR VSNIAWAKNG QALLYVVTDQ KKRPCRIYCS TIGSTDEDVL LHEEFEGNVH VNIRHTKDFH FVTVNTFSTT 301: FSKVFLINAA DPFSGLALVW EHNAPAHCII EHHQGFLYLF TNASNDGGTV DHHYLLRSPV HFSSCQRIWE TVFINDPELI IEDVDFCKKH LSLIVKEMQS 401: FKICVVDLPL KTKRVPVHLR DIKPRYLPLP KHVSQIFPGT NYDFNSPTMR FTISSLVMPD AVVDYDLLNG KWNIVQQQNM LHERTRVLYG TANSTESPNI 501: PSGTRTVSFD TEDTTAENDN LWNDLTEFYA CDYHEVSSHD GAMVPLSIVY SRAQKEENQK PGLLHVHGAY GEMLDKRWRS ELKSLLDRGW VLAYADVRGG 601: GGKGKKWHQD GRGAKKLNSI KDYIQCAKYL VENNIVEENK LAGWGYSAGG LVVASAINHC PDLFQAAVLK VPFLDPTHTL IYPILPLTAE DYEEFGYPGD 701: INDFHAIREY SPYDNIPKDV LYPAVLVTSS FNTRFGVWEA AKWVARVRDN TFNDPERPVL LNLTTDIVEE NRFLQTKESA LEIAFLIKMM ES |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)