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AT5G63130.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Octicosapeptide/Phox/Bem1p family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Octicosapeptide/Phox/Bem1p family protein; CONTAINS InterPro DOMAIN/s: Octicosapeptide/Phox/Bem1p (InterPro:IPR000270); BEST Arabidopsis thaliana protein match is: Octicosapeptide/Phox/Bem1p family protein (TAIR:AT3G48240.1); Has 353 Blast hits to 353 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 353; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JEJSeggNOG:ENOG41118CHEMBL:AB008265EMBL:AK117358
EMBL:BT003726EMBL:CP002688EnsemblPlants:AT5G63130EnsemblPlants:AT5G63130.1
entrez:836433GeneID:836433Gramene:AT5G63130.1hmmpanther:PTHR31066
hmmpanther:PTHR31066:SF10HOGENOM:HOG000240629IntAct:Q9FML0InterPro:IPR000270
KEGG:ath:AT5G63130OMA:CYACRVHPfam:PF00564PhylomeDB:Q9FML0
Proteomes:UP000006548RefSeq:NP_201118.1SMART:SM00666SMR:Q9FML0
STRING:3702.AT5G63130.1SUPFAM:SSF54277TAIR:AT5G63130UniGene:At.61015
UniProt:Q9FML0
Coordinates (TAIR10) chr5:+:25323190..25323857
Molecular Weight (calculated) 21547.50 Da
IEP (calculated) 8.55
GRAVY (calculated) -0.56
Length 192 amino acids
Sequence (TAIR10)
(BLAST)
001: MVAVDYTEKN SGSSLKFLCS YGGRILPRST DGKLRYVGGH TRVLSVDRSI SFSELMKKLY EFCGYSVDLR CQLPNGDLET LISVKSEEEL AEIVEEYDRI
101: CGAKIRAVLS PPRSSHKTES SPSSSGDRSP KSPFSVTPSP PNSPSPAYGR YLQSRYCLPS TDLPPRRYIQ RAEESHCCYA CRVHKDSRLV WH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)