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AT5G61310.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Cytochrome c oxidase subunit Vc family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Cytochrome c oxidase subunit Vc family protein; FUNCTIONS IN: cytochrome-c oxidase activity; INVOLVED IN: oxidation reduction; LOCATED IN: mitochondrial respiratory chain, endomembrane system; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Cytochrome c oxidase subunit Vc (InterPro:IPR008432); BEST Arabidopsis thaliana protein match is: Cytochrome c oxidase subunit Vc family protein (TAIR:AT2G47380.1); Has 93 Blast hits to 93 proteins in 21 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G61310-MONOMERBioCyc:ARA:GQT-2132-MONOMERBioCyc:ARA:GQT-2733-MONOMERBioCyc:ARA:GQT-2734-MONOMER
eggNOG:ENOG410J37SeggNOG:ENOG410YTGPEMBL:AB010073EMBL:AY088342
EMBL:CP002688EnsemblPlants:AT5G61310EnsemblPlants:AT5G61310.1EnsemblPlants:AT5G61310.2
EnsemblPlants:AT5G61310.3EnsemblPlants:AT5G61310.4entrez:836252ExpressionAtlas:Q9FLK2
GeneID:836252Genevisible:Q9FLK2GO:GO:0005746GO:GO:0016021
Gramene:AT5G61310.1Gramene:AT5G61310.2Gramene:AT5G61310.3Gramene:AT5G61310.4
hmmpanther:PTHR34372hmmpanther:PTHR34372:SF2InParanoid:Q9FLK2InterPro:IPR008432
KEGG:ath:AT5G61310OMA:EICIGIVPaxDb:Q9FLK2Pfam:Q9FLK2
PhylomeDB:Q9FLK2PIRSF:PIRSF038131PRIDE:Q9FLK2PRO:PR:Q9FLK2
ProDom:PD019231Proteomes:UP000006548RefSeq:NP_001032118.1RefSeq:NP_001119471.1
RefSeq:NP_200939.1RefSeq:NP_851239.1STRING:3702.AT5G61310.1TAIR:AT5G61310
TMHMM:TMhelixUniGene:At.29110UniProt:Q2HIR0UniProt:Q9FLK2
Coordinates (TAIR10) chr5:-:24653543..24653737
Molecular Weight (calculated) 7092.75 Da
IEP (calculated) 9.17
GRAVY (calculated) 0.00
Length 64 amino acids
Sequence (TAIR10)
(BLAST)
1: MAGHKIAHAT LKGPSVVKEL VIGLTLGLAA GGLWKMHHWN EQRKTRVFYD LLERGEIGVV VTEE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)