AT5G61200.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.991 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
BEST Arabidopsis thaliana protein match is: myosin heavy chain-related (TAIR:AT5G07890.2); Has 22208 Blast hits to 14344 proteins in 1121 species: Archae - 324; Bacteria - 1921; Metazoa - 12512; Fungi - 1464; Plants - 1009; Viruses - 53; Other Eukaryotes - 4925 (source: NCBI BLink). | ||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:24621035..24622081 | ||||||||||||||||||||||||
| Molecular Weight (calculated) | 32923.20 Da | ||||||||||||||||||||||||
| IEP (calculated) | 4.42 | ||||||||||||||||||||||||
| GRAVY (calculated) | -0.68 | ||||||||||||||||||||||||
| Length | 283 amino acids | ||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNDLSEHVLD LEVRVTKSGK LEEEVNYLRE ELCSSKSEQL LLLQELESTE TELQFSLFSV EKLEESVSSL TLESQCEIES IKLDIVALEQ ALFDAQKFQG 101: ESIQENDKLR EIVKELRLNS REAEENAECL EKQNKELMER CVASERNIKD LRQSFRGRLE SESEAPVNPD CFHDIIKKLE VFQDGKLRDK MEDMARQILQ 201: YKDLVKQLKD ELKEEKLKAK EEAEDLTQEM AELRYEMTCL LEEECKRRAC IEQASLQRIA NLEAQIKREK NKSSTCLVPL PAV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)