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AT5G58800.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:30447334 (2019): plasma membrane
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25641898 (2015): plasma membrane
  • PMID:24030099 (2013): plasma membrane
  • PMID:22215637 (2012): plasma membrane
  • PMID:17317660 (2007): plasma membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Quinone reductase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Quinone reductase family protein; FUNCTIONS IN: oxidoreductase activity, FMN binding; INVOLVED IN: negative regulation of transcription; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Flavoprotein WrbA (InterPro:IPR010089), NADPH-dependent FMN reductase (InterPro:IPR005025), Flavodoxin/nitric oxide synthase (InterPro:IPR008254); BEST Arabidopsis thaliana protein match is: Quinone reductase family protein (TAIR:AT4G27270.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G58800-MONOMERBioCyc:ARA:GQT-2209-MONOMERBioGrid:21241EC:1.6.5.2
eggNOG:COG0655eggNOG:KOG3135EMBL:AB020755EMBL:AY064055
EMBL:AY096367EMBL:CP002688EnsemblPlants:AT5G58800EnsemblPlants:AT5G58800.1
EnsemblPlants:AT5G58800.2entrez:835997Gene3D:3.40.50.360GeneID:835997
Genevisible:Q9LUX9GO:GO:0003955GO:GO:0005886GO:GO:0010181
GO:GO:0045892Gramene:AT5G58800.1Gramene:AT5G58800.2hmmpanther:PTHR30546
hmmpanther:PTHR30546:SF11HOGENOM:HOG000030539InParanoid:Q9LUX9IntAct:Q9LUX9
InterPro:IPR005025InterPro:IPR008254InterPro:IPR010089InterPro:IPR029039
KEGG:00130+1.6.5.2KEGG:ath:AT5G58800KO:K03809OMA:GIFWSTG
PaxDb:Q9LUX9Pfam:PF03358Pfam:Q9LUX9Pfscan:PS50902
PhylomeDB:Q9LUX9PRIDE:Q9LUX9PRO:PR:Q9LUX9PROSITE:PS50902
ProteinModelPortal:Q9LUX9Proteomes:UP000006548RefSeq:NP_001032099.1RefSeq:NP_200688.2
SMR:Q9LUX9STRING:3702.AT5G58800.1SUPFAM:SSF52218TAIR:AT5G58800
TIGRfam:TIGR01755TIGRFAMs:TIGR01755UniGene:At.27481UniGene:At.55615
UniProt:Q9LUX9
Coordinates (TAIR10) chr5:-:23746032..23746895
Molecular Weight (calculated) 22724.20 Da
IEP (calculated) 6.81
GRAVY (calculated) -0.19
Length 207 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVTKIYIVY YSLHGHVETM AREVLRGVNS VPDVEATLWQ VPETLPEKIL EKVKAVPRPD DVPDIRPEQL AEADGFMFGF PSRFGVMASQ VMTFFDNTND
101: LWTTQALAGK PAGIFWSTGF HGGGQELTAL TAVTKLAHHG MIFVPVGYTF GKSMYEMGEV KGGSPYGSGT YAADGSREPT ELEIQQANYH GKYFAGIAKK
201: LKKRSPV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)