AT2G15695.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:peroxisome 0.512 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein of unknown function DUF829, transmembrane 53 | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein of unknown function DUF829, transmembrane 53; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF829, transmembrane 53 (InterPro:IPR008547); BEST Arabidopsis thaliana protein match is: Protein of unknown function DUF829, transmembrane 53 (TAIR:AT5G44250.1); Has 153 Blast hits to 151 proteins in 28 species: Archae - 0; Bacteria - 0; Metazoa - 35; Fungi - 0; Plants - 107; Viruses - 0; Other Eukaryotes - 11 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:6834194..6836336 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 46887.70 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.01 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.21 | ||||||||||||||||||||||||||||||||
| Length | 420 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MIGGGRVYWG KKLDKEMEDA AVVDGGGSNG VVVIFVWSSI NENQLMNFVD LYSSLGWNSL VCRADFLTAV YPEMALSLAF HLLSELVEEL KSRPCPVIFL 101: AFSGAPKACM YKVLQVIMDD CEAQIHPDDS QLVRTCLSGH VYDSGPLDFT SDLNVKFALH PTIRRMSGPS RLVSWVAKGI SSGLDGLYLT RFESQRSEYW 201: QALYSSVEIG APYLILCSEN DELAPLQVIS SFTHQLQELG GEVKVVKWKN SPHAGHYAHN PIQYRAVISN FLEKAISVHL HKIRQLGERA HTHDEISELI 301: CDLQKVAVNS NQSLRRVATG PCDHFFLPSS APYQSNSNNS DPSSSQEEQR ERSSFRPLQP TSINAHSVLG QFLFDSCVPK NIEGWDIRFA GCLNGQPYAT 401: SSSRKNSNLG FKKRFFRSRL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)