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AT5G53390.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 0.962
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no coexpression data
Description (TAIR10) protein_coding : O-acyltransferase (WSD1-like) family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
O-acyltransferase (WSD1-like) family protein; CONTAINS InterPro DOMAIN/s: O-acyltransferase, WSD1, C-terminal (InterPro:IPR009721), O-acyltransferase, WSD1, N-terminal (InterPro:IPR004255); BEST Arabidopsis thaliana protein match is: O-acyltransferase (WSD1-like) family protein (TAIR:AT2G38995.2); Has 1220 Blast hits to 1207 proteins in 180 species: Archae - 4; Bacteria - 957; Metazoa - 16; Fungi - 0; Plants - 224; Viruses - 0; Other Eukaryotes - 19 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-2840-MONOMEReggNOG:ENOG410IIYJeggNOG:ENOG410ZYUMEMBL:AB189175
EMBL:CP002688EnsemblPlants:AT5G53390EnsemblPlants:AT5G53390.1entrez:835420
GeneID:835420GO:GO:0004144GO:GO:0005886GO:GO:0016021
GO:GO:0019432GO:GO:0047196GO:GO:0048446Gramene:AT5G53390.1
hmmpanther:PTHR31650hmmpanther:PTHR31650:SF2HOGENOM:HOG000238318InterPro:IPR004255
InterPro:IPR009721KEGG:00073+2.3.1.20KEGG:00561+2.3.1.20KEGG:ath:AT5G53390
OMA:GCKTSINPfam:PF03007Pfam:PF06974PhylomeDB:Q5KS41
Proteomes:UP000006548RefSeq:NP_200151.2STRING:3702.AT5G53390.1SUPFAM:SSF52777
TAIR:AT5G53390TMHMM:TMhelixUniGene:At.29556unipathway:UPA00282
UniProt:Q5KS41
Coordinates (TAIR10) chr5:-:21656951..21659207
Molecular Weight (calculated) 54852.50 Da
IEP (calculated) 9.37
GRAVY (calculated) -0.00
Length 486 amino acids
Sequence (TAIR10)
(BLAST)
001: MGEDKKTARE TVEEEPLSPC SRLFNSPDFN CAIIVTMGSK VKGDTPAIIH GLEHTLVNHP RFSSILEMNN GKKPRWVRTK VKVEEHVIVP DVDPDIENPD
101: QYLEDYISKL TTIPMDLSKP LWEMHLLGVK TSNAESYAIL KIHHSLGDGM SLMSLLLACT RKTSDPEALP TVAVHKKRFG PSCNSGFFNK IWWLFVGLWF
201: ILRLLFNTFV DILMFALTIF VLRDTETPLL AKPGSELIPK RFVHRIISFD DVKLVKNAMK MTVNDVLLGV TQAGLSRYLS RKYDQEATPK SKESMRRIRL
301: RSAIMINLRP NAGIEALADM MAKKSKCRWG NLFGYILLPF SVGLETDPLE YVRQAKATID RKKHSLEAVF SMAFFKLILK VLGLKASVVL VRKVIHSTTL
401: SFSNVVGPKE EITFHGHPLN YISPCVFGHP HALTLHFQTY ANKVIISVTA DPTVIPDPHK MCDDLVESLK MIKAAVLERG LYEIEV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)