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AT5G45940.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 0.990
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : nudix hydrolase homolog 11
Curator
Summary (TAIR10)
Encodes a CoA pyrophosphatase, also has minor activity of NADH pyrophosphatase. Most strongly expressed in embryo cotyledon and hypocotyl, flower, and phloem of vascular tissue. Over-expression mutant had a bigger plant with wider rosette.
Computational
Description (TAIR10)
nudix hydrolase homolog 11 (NUDT11); FUNCTIONS IN: hydrolase activity, NAD+ diphosphatase activity, CoA pyrophosphatase activity; INVOLVED IN: multicellular organismal development; LOCATED IN: cytosol; EXPRESSED IN: 27 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NUDIX hydrolase domain-like (InterPro:IPR015797), NUDIX hydrolase domain (InterPro:IPR000086); BEST Arabidopsis thaliana protein match is: nudix hydrolase homolog 15 (TAIR:AT1G28960.5); Has 3666 Blast hits to 3665 proteins in 1325 species: Archae - 59; Bacteria - 2305; Metazoa - 169; Fungi - 188; Plants - 101; Viruses - 0; Other Eukaryotes - 844 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G45940-MONOMEREC:3.6.1.-eggNOG:COG0494eggNOG:KOG3069
EMBL:AB016870EMBL:AY085250EMBL:CP002688EnsemblPlants:AT5G45940
EnsemblPlants:AT5G45940.1entrez:834634Gene3D:3.90.79.10GeneID:834634
Genevisible:Q8LET2GO:GO:0000210GO:GO:0005778GO:GO:0005829
GO:GO:0006753GO:GO:0007275GO:GO:0008893GO:GO:0010945
GO:GO:0015937GO:GO:0016021GO:GO:0046872GO:GO:2001294
gramene_pathway:3.6.1.22gramene_pathway:PWY-5381hmmpanther:PTHR12992hmmpanther:PTHR12992:SF9
HOGENOM:HOG000250455InParanoid:Q8LET2InterPro:IPR000086InterPro:IPR015797
KEGG:ath:AT5G45940OMA:IHCFEYTPaxDb:Q8LET2Pfam:PF00293
Pfam:Q8LET2Pfscan:PS51462PhylomeDB:Q8LET2PRIDE:Q8LET2
PRO:PR:Q8LET2PROSITE:PS51462ProteinModelPortal:Q8LET2Proteomes:UP000006548
RefSeq:NP_001119380.1RefSeq:NP_199406.1SMR:Q8LET2STRING:3702.AT5G45940.1
SUPFAM:SSF55811TAIR:AT5G45940tair10-symbols:atnudt11tair10-symbols:NUDT11
UniGene:At.29985UniGene:At.70220UniProt:Q8LET2
Coordinates (TAIR10) chr5:-:18629665..18630597
Molecular Weight (calculated) 25680.50 Da
IEP (calculated) 5.72
GRAVY (calculated) -0.57
Length 222 amino acids
Sequence (TAIR10)
(BLAST)
001: MSSTTTDSTE LQNLIKLFQN CQTHPRQHFP AKSSAVLVCL YQEQREDKNE LRVILTKRST TLSSHPGEVA LPGGKRDQED KDDIATALRE AREEIGLDPS
101: LVTIISVLEP FVNKKGMSVA PVIGFLHDKK AFKQLPNPAE VEEIFDVPLE MFLKDRNRRA EEREHEGERY LLQYFDYYSE DKERSFIIWA LTAGILIRVA
201: SIVYQRLPEF QERKPSFWNQ PN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)