AT5G44860.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.896 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G19950.1); Has 233 Blast hits to 227 proteins in 25 species: Archae - 0; Bacteria - 13; Metazoa - 1; Fungi - 0; Plants - 216; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:18110688..18111653 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 35630.60 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 6.79 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.97 | ||||||||||||||||||||||||||||
| Length | 321 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MDLAAEELQF LNIQGILRES TTIPKFSPKT FYLITLTLIF PLSFAILAHS LFTQPILAQL DATPPSDQSK TNHEWTLLLI YQFIYVIFLF AFSLLSTAAV 101: VFTVASLYTG KPVSFSSTMS AIPLVLKRLF ITFLWVSLMM LVYNSVFLLF LVVLIVAIDL QSVILAVFSM VVIFVLFLGV HVYMTAWWHL ASVVSVLEPI 201: YGIAAMKKSY ELLNGRTNMA CSMVFMYLAL CGITAGVFGG VVVHGGDDFG LFTKIVVGGF LVGILVIVNL VGLLVQSVFY YVCKSFHHQP IDKSALHDHL 301: GGYLGDYVPL KSSIQMENFD I |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)