AT5G42770.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Maf-like protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Maf-like protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytoplasm; CONTAINS InterPro DOMAIN/s: Maf-like protein (InterPro:IPR003697); BEST Arabidopsis thaliana protein match is: Maf-like protein (TAIR:AT5G66550.1); Has 6251 Blast hits to 6251 proteins in 1982 species: Archae - 28; Bacteria - 4831; Metazoa - 54; Fungi - 73; Plants - 111; Viruses - 0; Other Eukaryotes - 1154 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:17152147..17154355 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 22826.70 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.75 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||
| Length | 206 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MESNHPHFKL ILGSSSIARR KILTDMGYQF TLMSADIDEK SIRKEKPEEL VLALAEAKAE AIMQRIPDGE NIEEDKSTLL ITCDQVVVYE DAVREKPSSV 101: EEAREYIRGY SKGHTATVSS VAVTNLKTGV RKGGVDRVEI YFNEIPEETI EKLIEEGMVL KVAGALLIEH PLILPCVKEV VGTTDSVMGL PKELTEKLIK 201: EVLAST |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)