AT5G27400.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.914 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: Methyltransferase-16, putative (InterPro:IPR019410); BEST Arabidopsis thaliana protein match is: D-aminoacid aminotransferase-like PLP-dependent enzymes superfamily protein (TAIR:AT5G27410.2); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:9676362..9678285 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 41178.20 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.61 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.07 | ||||||||||||||||||||||||||||||||
| Length | 369 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAAETEAESQ YLNVLSAFLA IEPVDSVITL ARGCTGGSIT ENAQRFFWEI CVEAAANGNG SYAKKLLKKL INEVELENGE VLDEVYEEYA LYMLTSKEDI 101: LVKENIRITK FISFLFPEGS YKHPSCPRSR KLVIPLHCSL NMLEGDTGCS IWPSSLFLSE FVLSFPELFA NKACFEVGSG VGMVGICLAH VKAKEVILTD 201: GDLLTLSNMK LNLERNHLNY DDEFLKQPGE AQSTRVKCTH LPWETASESE LSQYRPDIVL GADVIYDPSC LPHLLRVLVA LLKNPPKRGN GSLETEDRDT 301: TQEEHSPAVA YIASVIRNVD TFNVCLTLAD QMDLSITDVT AELTPRFELL PYMHSYDRST VRLFSISSR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)