AT5G26850.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.979 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Uncharacterized protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Uncharacterized protein; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Uncharacterized protein (TAIR:AT2G41830.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:9445950..9450584 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 109861.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.42 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||
| Length | 983 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGFISRNVFP ACESMCICCP ALRSRSRQPV KRYKKLLGEI FPKSPDGGPN ERKIVKLCEY AAKNPIRIPK IAKFLEERCY KDLRSEQMKF INIVTEAYNK 101: MLCHCKDQMA YFATSLLNVV TELLDNSKQD TPTILGCQTL TRFIYSQVDG TYTHSIEKFA LKVCSLAREE GEEHQKQCLR ASGLQCLSAM VWYMGEFSHI 201: FATVDEIVHA ILDNYEADMI VQTNEDREEQ NCNWVNEVIR CEGRGTTICN SPSYMIVRPR TARKDPTLLT KEETEMPKVW AQICLQRMVD LAKESTTLRQ 301: ILDPMFSYFN SRRQWTPPNG LAMIVLSDAV YLMETSGSQQ LVLSTVVRHL DNKHVANDPE LKAYIIQVAG CLAKLIRTSS YLRDISFVND LCRHLRKSFQ 401: ATARSIGDEE LNLNVMIQNS IEDCLREIAK GIVNTQPLFD MMAVSVEGLP SSGIVSRAAV GSLLILAHAM SSALSPSMRS QQVFPDTLLD ALLKAMLHPN 501: VETRVGAHEI FSVILLQSSG QSQAGLASVR ASGYLNESRN WRSDTTSAFT SVTARLDKLR KEKDGVKIEK NGYNNTHEDL KNYKSSPKFH KLNSIIDRTA 601: GFINLADMLP SMMKFTEDQI GQLLSAFWIQ SALPDILPSN IEAIAHSFSL VLLSLRLKNP DDGLVVRAFQ LLFSLRTLSL DLNNGTLPSV CKRLILALST 701: SMLMFAAKIY QIPHICEMLK AQLPGDVDPY LFIGDDLQLH VRPQANMKDF GSSSDSQMAT SMLFEMRSKV ELSNTIITDI VAKNLPKLSK LEEADVKMQI 801: LEQFTPDDAF MFGSRPNIEP QPNQSISKES LSFDEDIPAG SMVEDEVTSE LSVRFPPRGS PSPSIPQVIS IGQLMESALE VAGQVVGSSV STSPLPYDTM 901: TNRCETFGTG TREKLSRWLA TENRQMNGLY GNSLEESSAL EKVVEDGNIY GRESGMLQDS WSMMRLPPAS PFDNFLKAAG AGR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)