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AT5G22640.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : MORN (Membrane Occupation and Recognition Nexus) repeat-containing protein
Curator
Summary (TAIR10)
EMB1211 is a MORN (multiple membrane occupation and recognition nexus) motif containing protein involved in embryo development and chloroplast biogenesis.
Computational
Description (TAIR10)
embryo defective 1211 (emb1211); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: chloroplast organization, embryo development, embryo development ending in seed dormancy; LOCATED IN: chloroplast thylakoid membrane, chloroplast, chloroplast envelope; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: MORN motif (InterPro:IPR003409); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IF75eggNOG:ENOG41108ABEMBL:AB006699EMBL:AY094427
EMBL:CP002688EnsemblPlants:AT5G22640EnsemblPlants:AT5G22640.1entrez:832327
ExpressionAtlas:Q8LPR8GeneID:832327Genevisible:Q8LPR8GO:GO:0008565
GO:GO:0009507GO:GO:0009535GO:GO:0009536GO:GO:0009658
GO:GO:0009706GO:GO:0009793GO:GO:0009941GO:GO:0045037
hmmpanther:PTHR23084hmmpanther:PTHR23084:SF155HOGENOM:HOG000030753InParanoid:Q8LPR8
InterPro:IPR003409iPTMnet:Q8LPR8ncoils:CoilOMA:QGLVRYE
PaxDb:Q8LPR8Pfam:PF02493Pfam:Q8LPR8PhylomeDB:Q8LPR8
PRIDE:Q8LPR8PRO:PR:Q8LPR8ProMEX:Q8LPR8ProteinModelPortal:Q8LPR8
Proteomes:UP000006548RefSeq:NP_197656.2SMR:Q8LPR8STRING:3702.AT5G22640.1
SUPFAM:0038399TAIR:AT5G22640tair10-symbols:emb1211TCDB:3.A.9.1.2
UniGene:At.8422UniProt:Q8LPR8
Coordinates (TAIR10) chr5:+:7529423..7533641
Molecular Weight (calculated) 99958.80 Da
IEP (calculated) 4.09
GRAVY (calculated) -0.88
Length 871 amino acids
Sequence (TAIR10)
(BLAST)
001: MANEELTESQ QQEDPSQQLP NADEEKGSDS DSNSDSDASS QSSGDDFYIS ESENEAEGDN TIFNYVRPSD IPPDPNANPE TNIRRFNRVL DGKRVKRMQE
101: EEEDKYTFYE DLFDFPRDPE RWKEQDLREI WADGPLEMTK PGWDPAWADE DDWDVVNDEI QEGRDPGIQP FYVPYRKPYP AIPDNHYDIE NAKGVVEELD
201: RIEEFLQWVS YIFPDGSSYE GTVWDDLAQG KGVYIAENGL VRYEGEWLQN DMEGHGVIDV DIPDIEPIPG SKLEAKMRAE GRIIKRDYMT PEDRKWLEMD
301: VEDSVALTDG NFQVPFYENE EWVTQFGEKP EKGRYRYAGQ WKHSRMHGCG VYEVNERILY GRFYFGELLE EEHGCTVDIC ALHSGLAEVA AAKARMFVNK
401: PDGMIREERG PYGDPQHPYF YEEDDVWMAP GFINQFYEVP EYWETYVGEV DQEREMWLNS FYKAPLRLPM PAELEHWWEN VEVTPEFVLL NKEPEPDPND
501: PSKLVQKEDP VILHTPTGRI INYVEDEKHG IRLFWQPPLE EGEEVDPSKV EFLPLGFDEF YGKEVVVKKE HPIKSFVLGI EKSVKPMLDG LEKWTEEKKK
601: AYEERKEMIQ QELELVEAEI CLEEAIEDMD EELKKKEQEE EKKTEMGLTE EDEDVLVPVY KEEKVVTAKE KIQENKQEEK YKDDDDEDDD DGDDDDDDDD
701: DDDLGPSSFG SADKGRRNSP FSSSSLSFAS CTLFPAVQSR LESSFLAWKQ HRAEPSKVNT GIIKGADTAS ASIHFPPLSS NNARLKMGKV ANRGCVQRSY
801: GSSRSQSQLM SLSRLLSCNA SSSSSPPDSS SSEYLKDSGL WETPVGDMSV VLSLQIQTKC SDLFAETPAV S
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)