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AT5G21482.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 0.989
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : cytokinin oxidase 7
Curator
Summary (TAIR10)
This gene used to be called AtCKX5. It encodes a protein whose sequence is similar to cytokinin oxidase/dehydrogenase, which catalyzes the degradation of cytokinins.
Computational
Description (TAIR10)
cytokinin oxidase 7 (CKX7); CONTAINS InterPro DOMAIN/s: Cytokinin dehydrogenase 1, FAD/cytokinin binding domain (InterPro:IPR015345), FAD-binding, type 2 (InterPro:IPR016166), FAD-linked oxidase-like, C-terminal (InterPro:IPR016164), FAD linked oxidase, N-terminal (InterPro:IPR006094); BEST Arabidopsis thaliana protein match is: cytokinin oxidase/dehydrogenase 1 (TAIR:AT2G41510.1); Has 8328 Blast hits to 8321 proteins in 1506 species: Archae - 208; Bacteria - 5322; Metazoa - 141; Fungi - 1495; Plants - 573; Viruses - 0; Other Eukaryotes - 589 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT5G21482-MONOMERBRENDA:1.5.99.12EC:1.5.99.12eggNOG:COG0277
eggNOG:KOG1231EMBL:AC140977EMBL:AF303981EMBL:CP002688
EnsemblPlants:AT5G21482EnsemblPlants:AT5G21482.1entrez:832248EvolutionaryTrace:Q9FUJ1
Gene3D:3.30.43.10Gene3D:3.30.465.10Gene3D:3.40.462.10GeneID:832248
GO:GO:0009823GO:GO:0016614GO:GO:0019139GO:GO:0050660
Gramene:AT5G21482.1gramene_pathway:1.5.99.12gramene_pathway:PWY-2841hmmpanther:PTHR11748
hmmpanther:PTHR11748:SF17HOGENOM:HOG000237593InParanoid:Q9FUJ1InterPro:IPR006094
InterPro:IPR015345InterPro:IPR016164InterPro:IPR016166InterPro:IPR016167
InterPro:IPR016169InterPro:IPR016170KEGG:ath:AT5G21482KO:K00279
OMA:VRWTRVVPaxDb:Q9FUJ1PDB:2EXRPDB:2Q4W
PDBsum:2EXRPDBsum:2Q4WPfam:PF01565Pfam:PF09265
Pfam:Q9FUJ1Pfscan:PS51387PhylomeDB:Q9FUJ1PRIDE:Q9FUJ1
PRO:PR:Q9FUJ1PROSITE:PS51387ProteinModelPortal:Q9FUJ1Proteomes:UP000006548
RefSeq:NP_850863.1SMR:Q9FUJ1STRING:3702.AT5G21482.1SUPFAM:SSF55103
SUPFAM:SSF56176TAIR:AT5G21482tair10-symbols:ATCKX5tair10-symbols:CKX7
UniGene:At.16886UniProt:Q9FUJ1
Coordinates (TAIR10) chr5:+:7226842..7230052
Molecular Weight (calculated) 57978.70 Da
IEP (calculated) 4.78
GRAVY (calculated) -0.15
Length 524 amino acids
Sequence (TAIR10)
(BLAST)
001: MIAYIEPYFL ENDAEAASAA TAAGKSTDGV SESLNIQGEI LCGGAAADIA GRDFGGMNCV KPLAVVRPVG PEDIAGAVKA ALRSDKLTVA ARGNGHSING
101: QAMAEGGLVV DMSTTAENHF EVGYLSGGDA TAFVDVSGGA LWEDVLKRCV SEYGLAPRSW TDYLGLTVGG TLSNAGVSGQ AFRYGPQTSN VTELDVVTGN
201: GDVVTCSEIE NSELFFSVLG GLGQFGIITR ARVLLQPAPD MVRWIRVVYT EFDEFTQDAE WLVSQKNESS FDYVEGFVFV NGADPVNGWP TVPLHPDHEF
301: DPTRLPQSCG SVLYCLELGL HYRDSDSNST IDKRVERLIG RLRFNEGLRF EVDLPYVDFL LRVKRSEEIA KENGTWETPH PWLNLFVSKR DIGDFNRTVF
401: KELVKNGVNG PMLVYPLLRS RWDDRTSVVI PEEGEIFYIV ALLRFVPPCA KVSSVEKMVA QNQEIVHWCV KNGIDYKLYL PHYKSQEEWI RHFGNRWSRF
501: VDRKAMFDPM AILSPGQKIF NRSL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)