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AT5G19620.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : outer envelope protein of 80 kDa
Curator
Summary (TAIR10)
AtOEP80 is paralog to the chloroplastic protein translocation channel Toc75. Mutations in this locus result in embryo lethality.
Computational
Description (TAIR10)
outer envelope protein of 80 kDa (OEP80); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: embryo development ending in seed dormancy; LOCATED IN: mitochondrion, chloroplast, plastid, membrane, chloroplast envelope; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Bacterial surface antigen (D15) (InterPro:IPR000184), Surface antigen variable number (InterPro:IPR010827); BEST Arabidopsis thaliana protein match is: Outer membrane OMP85 family protein (TAIR:AT3G44160.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:17358eggNOG:COG4775eggNOG:ENOG410IIE0EMBL:AF296838
EMBL:AF360205EMBL:AY040053EMBL:CP002688EnsemblPlants:AT5G19620
EnsemblPlants:AT5G19620.1entrez:832082GeneID:832082Genevisible:Q9C5J8
GO:GO:0005739GO:GO:0009507GO:GO:0009536GO:GO:0009658
GO:GO:0009707GO:GO:0009941GO:GO:0016020Gramene:AT5G19620.1
hmmpanther:PTHR12815hmmpanther:PTHR12815:SF7HOGENOM:HOG000233123InParanoid:Q9C5J8
InterPro:IPR000184KEGG:ath:AT5G19620ncoils:CoilOMA:AGLIFQH
PaxDb:Q9C5J8Pfam:PF01103Pfam:Q9C5J8PhylomeDB:Q9C5J8
PRIDE:Q9C5J8PRO:PR:Q9C5J8PROSITE:PS51779ProteinModelPortal:Q9C5J8
Proteomes:UP000006548RefSeq:NP_568378.1SMR:Q9C5J8STRING:3702.AT5G19620.1
SwissPalm:Q9C5J8TAIR:AT5G19620tair10-symbols:ATOEP80tair10-symbols:EMB213
tair10-symbols:OEP80tair10-symbols:TOC75TCDB:1.B.33.2.2UniGene:At.25139
UniProt:Q9C5J8
Coordinates (TAIR10) chr5:+:6623323..6627641
Molecular Weight (calculated) 79941.00 Da
IEP (calculated) 8.27
GRAVY (calculated) -0.37
Length 732 amino acids
Sequence (TAIR10)
(BLAST)
001: MHCHNDDVRF SSSSIRIHSP SPKEQHSLLT NLQSCSKTFV SHLSNTRNSL NQMLQSLKNR HTPPPRSVRR PNLPTQMLNS VTQLMIGKSS PISLSLIQST
101: QFNWSESRDE NVETIRGLSS PLLCCASLSL TRPNESTQSV EGKDTVQQQK GHSVSRNAEE RVLISEVLVR TKDGEELERK DLEMEALAAL KACRANSALT
201: IREVQEDVHR IIESGYFCSC TPVAVDTRDG IRLMFQVEPN QEFRGLVCEN ANVLPSKFIH EAFRDGFGKV INIKRLEEAI TSINGWYMER GLFGIVSDID
301: TLSGGIVRLQ VAEAEVNNIS IRFLDRKTGE PTKGKTSPET ILRQLTTKKG QVYSMLQGKR DVDTVLAMGI MEDVSIIPQP AGDSGKVDLI MNCVERPSGG
401: FSAGGGISSG ITSGPLSGLI GSFAYSHRNL FGRNQKLNVS LERGQIDSIF RINYTDPWIE GDDKRTSRSI MVQNSRTPGN LVHGNQPDNS SLTIGRVTAG
501: VEYSRPFRPK WNGTAGLIFQ HAGARDEQGN PIIKDFYSSP LTASGKPHDE TMLAKLESIY TGSGDQGSTM FAFNMEQGLP VLPEWLCFNR VTGRARKGIH
601: IGPARFLFSL SGGHVVGKFS PHEAFVIGGT NSVRGYEEGA VGSGRSYVVG SGELSFPVRG PVEGVIFTDY GTDMGSGSTV PGDPAGARLK PGSGYGYGLG
701: VRVDSPLGPL RLEYAFNDQH AGRFHFGVGL RN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)