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AT5G19550.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31975158 (2020): plastid
  • PMID:31871212 (2020): mitochondrion
  • PMID:31615849 (2019): plastid plastid thylakoid
  • PMID:31520498 (2020): mitochondrion
  • PMID:31186290 (2019): cytosol None
  • PMID:31023727 (2019): mitochondrion
  • PMID:30783145 (2019): extracellular region plant-type cell wall
  • PMID:29104584 (2017): nucleus nuclear matrix nucleolus
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:27943495 (2017): mitochondrion
  • PMID:27122571 (2016): mitochondrion
  • PMID:26781341 (2016): plasma membrane
  • PMID:25900983 (2015): plant-type vacuole plant-type vacuole membrane
  • PMID:25900983 (2015): Golgi
  • PMID:25900983 (2015): Golgi trans-Golgi network
  • PMID:25900983 (2015): Golgi Golgi apparatus Golgi membrane
  • PMID:25900983 (2015): Golgi trans-Golgi network early endosome
  • PMID:25900983 (2015): Golgi trans-Golgi network multivesicular body
  • PMID:25641898 (2015): plasma membrane
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:23750852 (2013): mitochondrion
  • PMID:23673981 (2013): plastid plastid stroma plastoglobules
  • PMID:22550958 (2012): plastid
  • PMID:21841088 (2011): mitochondrion
  • PMID:21533090 (2011): extracellular region plant-type cell wall
  • PMID:21433285 (2011): plasma membrane
  • PMID:21311031 (2011): mitochondrion
  • PMID:21166475 (2011): cytosol
  • PMID:19334764 (2009): plasma membrane
  • PMID:17644812 (2007): plasma membrane
  • PMID:17151019 (2007): plant-type vacuole
  • PMID:15215502 (2004): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : aspartate aminotransferase 2
Curator
Summary (TAIR10)
Nitrogen metabolism. Major cytosolic isoenzyme controlling aspartate biosynthesis in the light.
Computational
Description (TAIR10)
aspartate aminotransferase 2 (ASP2); FUNCTIONS IN: L-aspartate:2-oxoglutarate aminotransferase activity, copper ion binding; INVOLVED IN: nitrogen compound metabolic process; LOCATED IN: cytosol, cell wall, plasma membrane; EXPRESSED IN: 26 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Aminotransferase, class I/classII (InterPro:IPR004839), Pyridoxal phosphate-dependent transferase, major domain (InterPro:IPR015424), Aminotransferases, class-I, pyridoxal-phosphate-binding site (InterPro:IPR004838), Aspartate/other aminotransferase (InterPro:IPR000796), Pyridoxal phosphate-dependent transferase, major region, subdomain 1 (InterPro:IPR015421); BEST Arabidopsis thaliana protein match is: aspartate aminotransferase 3 (TAIR:AT5G11520.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink).
Protein Annotations
EC:2.6.1.1eggNOG:COG1448eggNOG:KOG1411EMBL:AF296830
EMBL:BT025972EnsemblPlants:AT5G19550EnsemblPlants:AT5G19550.1entrez:832075
ExpressionAtlas:Q1EBW2Gene3D:3.40.640.10GeneID:832075GO:GO:0004069
GO:GO:0006103GO:GO:0006520GO:GO:0009058GO:GO:0030170
GO:GO:0080130Gramene:AT5G19550.1gramene_pathway:2.6.1.1gramene_pathway:ASPARTATESYN-PWY
hmmpanther:PTHR11879hmmpanther:PTHR11879:SF16InterPro:IPR000796InterPro:IPR004838
InterPro:IPR004839InterPro:IPR015421InterPro:IPR015424KEGG:00220+2.6.1.1
KEGG:00250+2.6.1.1KEGG:00270+2.6.1.1KEGG:00330+2.6.1.1KEGG:00350+2.6.1.1
KEGG:00360+2.6.1.1KEGG:00400+2.6.1.1KEGG:00401+2.6.1.1KEGG:00710+2.6.1.1
KEGG:00950+2.6.1.1KEGG:00960+2.6.1.1KEGG:ath:AT5G19550KO:K14454
ncoils:CoilOMA:GIAAYDKPANTHER:PTHR11879PaxDb:Q1EBW2
Pfam:P46645Pfam:PF00155PhylomeDB:Q1EBW2PRIDE:Q1EBW2
PRINTS:PR00799PROSITE:PS00105ProteinModelPortal:Q1EBW2RefSeq:NP_197456.1
scanprosite:PS00105SMR:Q1EBW2STRING:3702.AT5G19550.1SUPFAM:SSF53383
TAIR:AT5G19550tair10-symbols:AAT2tair10-symbols:ASP2UniGene:At.23762
UniProt:P46645UniProt:Q1EBW2
Coordinates (TAIR10) chr5:+:6598201..6601597
Molecular Weight (calculated) 44269.10 Da
IEP (calculated) 7.32
GRAVY (calculated) -0.10
Length 405 amino acids
Sequence (TAIR10)
(BLAST)
001: MDSVFSNVAR APEDPILGVT VAYNNDPSPV KINLGVGAYR TEEGKPLVLD VVRKAEQQLV NDPSRVKEYI PIVGISDFNK LSAKLILGAD SPAITESRVT
101: TVQCLSGTGS LRVGAEFLKT HYHQSVIYIP KPTWGNHPKV FNLAGLSVEY FRYYDPATRG LDFKGLLEDL GAAPSGAIVL LHACAHNPTG VDPTSEQWEQ
201: IRQLMRSKSL LPFFDSAYQG FASGSLDTDA QSVRTFVADG GECLIAQSYA KNMGLYGERV GALSIVCKSA DVASKVESQV KLVVRPMYSS PPIHGASIVA
301: TILKSSDMYN NWTIELKEMA DRIKSMRQQL FEAIQARGTP GDWSHIIKQI GMFTFTGLNK EQVEFMTKEF HIYMTSDGRI SMAGLSSKTV PHLADAMHAA
401: VTRLG
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)