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AT5G14690.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G01516.1); Has 86 Blast hits to 86 proteins in 16 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 84; Viruses - 2; Other Eukaryotes - 0 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410J46VeggNOG:ENOG410YTFSEMBL:AK228840EMBL:AL163792
EMBL:BT010822EMBL:BT011302EMBL:CP002688EnsemblPlants:AT5G14690
EnsemblPlants:AT5G14690.1entrez:831321GeneID:831321Gramene:AT5G14690.1
hmmpanther:PTHR33264hmmpanther:PTHR33264:SF6HOGENOM:HOG000143346KEGG:ath:AT5G14690
OMA:GTHCQNDPhylomeDB:Q9LYJ1PIR:T48642Proteomes:UP000006548
RefSeq:NP_196973.1TAIR:AT5G14690TMHMM:TMhelixUniGene:At.31896
UniProt:Q9LYJ1
Coordinates (TAIR10) chr5:-:4733862..4734515
Molecular Weight (calculated) 24647.80 Da
IEP (calculated) 8.01
GRAVY (calculated) -0.99
Length 217 amino acids
Sequence (TAIR10)
(BLAST)
001: MEENPHRVSR RNHGGTHCQN DAVDEENRRR RHNHHTHGDE VKCSSKRCRS WAAAAIADCV ALCCCPCAII NLLTLTLVKV PWMIGRRCLG GGGRNKKKRR
101: VIHRRKRRGN INGEDEFYHH NNHHRRFETA EEGEKCGCGG GGGGCYGGGD YDDHRFVVER DGSLTKEEEE EERTTSCKGE DHDESRISAR VEAERVWLEL
201: YQIGHLGFGR VSFTGIQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)