AT5G14020.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.720 What is SUBAcon? |
|||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Endosomal targeting BRO1-like domain-containing protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Endosomal targeting BRO1-like domain-containing protein; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: vacuole; EXPRESSED IN: root; CONTAINS InterPro DOMAIN/s: BRO1 (InterPro:IPR004328); BEST Arabidopsis thaliana protein match is: Endosomal targeting BRO1-like domain-containing protein (TAIR:AT1G73390.3); Has 94 Blast hits to 94 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 93; Viruses - 0; Other Eukaryotes - 1 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr5:-:4523730..4525819 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 44475.30 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 7.03 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.01 | ||||||||||||||||||||||||||||
| Length | 401 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGCAQSTIAV VGRKNKKRII QESVVFVLQF RVPVQSDLQR QLKGVSPKTT INRLTCLRNQ IELVAEDTGG SAISELRTAL EEYLSLLSGL IKKSKDGMEG 101: CVELKWRTLG DGRRAEICCT NLWMEMLIVI HMMAALALTE ANSLMIPKDC YASGSGNGVR VVSTDCRRDA VDLLLKASGY LEFCVREILT QLPHDIKSKL 201: PDDMQESVLQ TLSIQALGQG TEIQLGLAVD SQKATLSVKR RIACEQVIYF TQAYHCLSSC EAVSHGCAKK LLRFIYWKFL EAKAAAYYYH GLVTDKGSEP 301: ACHLSAVCCF LAAAEILGES KKACLSFCLA PPVTRAPPMW GVMKHLSQKI PEVAFRKSQT YGYLLEEEEK AMQCLPELPD FQLSLRPDDF ELPEIEDVSS 401: S |
||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)