AT5G03320.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.982 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT3G09830.2); Has 109980 Blast hits to 108978 proteins in 3984 species: Archae - 79; Bacteria - 12272; Metazoa - 40540; Fungi - 9373; Plants - 31986; Viruses - 364; Other Eukaryotes - 15366 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:802759..804242 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 47008.30 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.82 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.51 | ||||||||||||||||||||||||||||||||||||||||
| Length | 420 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKCFLFPLGD KKDEQRSPKP VSPTSNFSDV NKSGSDFSPR DVSGTSTVSS TGRNSNTSMS ARENNLREFT IGDLKSATRN FSRSGMIGEG GFGCVFWGTI 101: KNLEDPSKKI EVAVKQLGKR GLQGHKEWVT EVNFLGVVEH SNLVKLLGHC AEDDERGIQR LLVYEYMPNQ SVEFHLSPRS PTVLTWDLRL RIAQDAARGL 201: TYLHEEMDFQ IIFRDFKSSN ILLDENWTAK LSDFGLARLG PSPGSSHVST DVVGTMGYAA PEYIQTGRLT SKSDVWGYGV FIYELITGRR PLDRNKPKGE 301: QKLLEWVRPY LSDTRRFRLI VDPRLEGKYM IKSVQKLAVV ANLCLTRNAK ARPKMSEVLE MVTKIVEASS PGNGGKKPQL VPLKSQETSR VEEGKNKKVL 401: DGAEGGWLEK LWNPKNVRAC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)