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AT5G02100.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
endoplasmic reticulum 1.000
ASURE: endoplasmic reticulum
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Oxysterol-binding family protein
Curator
Summary (TAIR10)
Encodes a protein that binds to beta-sitosterol and localizes to the ER. The WFDE motif in ORP3a appears to be important for a direct interaction with PVA12 [Plant VAMP-Associated protein 12]. Mutation of this motif causes ORP3a to relocalize to the Golgi and cytosol. The interaction between PVA12 and ORP3a does not appear to be sterol-dependent.
Computational
Description (TAIR10)
UNFERTILIZED EMBRYO SAC 18 (UNE18); CONTAINS InterPro DOMAIN/s: Oxysterol-binding protein, conserved site (InterPro:IPR018494), Oxysterol-binding protein (InterPro:IPR000648); BEST Arabidopsis thaliana protein match is: OSBP(oxysterol binding protein)-related protein 3B (TAIR:AT3G09300.1); Has 2336 Blast hits to 2302 proteins in 216 species: Archae - 0; Bacteria - 0; Metazoa - 1125; Fungi - 658; Plants - 280; Viruses - 0; Other Eukaryotes - 273 (source: NCBI BLink).
Protein Annotations
BioGrid:17117eggNOG:ENOG410XP9EeggNOG:KOG1737EMBL:AL162508
EMBL:AY050839EMBL:AY091166EMBL:CP002688EnsemblPlants:AT5G02100
EnsemblPlants:AT5G02100.1entrez:831841GeneID:831841Genevisible:Q9LZM1
GO:GO:0005783GO:GO:0005794GO:GO:0006869GO:GO:0007338
GO:GO:0009567GO:GO:0032934Gramene:AT5G02100.1hmmpanther:PTHR10972
HOGENOM:HOG000239955InParanoid:Q9LZM1IntAct:Q9LZM1InterPro:IPR000648
InterPro:IPR018494iPTMnet:Q9LZM1KEGG:ath:AT5G02100OMA:GINFIAE
PANTHER:PTHR10972PaxDb:Q9LZM1Pfam:PF01237Pfam:Q9LZM1
PhylomeDB:Q9LZM1PIR:T48231PRIDE:Q9LZM1PRO:PR:Q9LZM1
PROSITE:PS01013ProteinModelPortal:Q9LZM1Proteomes:UP000006548RefSeq:NP_195830.1
scanprosite:PS01013SMR:Q9LZM1STRING:3702.AT5G02100.1SUPFAM:0051579
TAIR:AT5G02100tair10-symbols:ORP3Atair10-symbols:UNE18UniGene:At.25283
UniProt:Q9LZM1
Coordinates (TAIR10) chr5:+:413639..416016
Molecular Weight (calculated) 51547.60 Da
IEP (calculated) 4.88
GRAVY (calculated) -0.63
Length 453 amino acids
Sequence (TAIR10)
(BLAST)
001: MASNDPKNGG GFFASLASSI TNFGSAMSKS VNGLMGYEGL EVINPEGSTD DAEEEAGRGR WKQEERDGYW KMMQKYIGSD VTSMVTLPVI IFEPMTMLQK
101: MAELMEYSYL LDMADKTEDP YMRMVYASSW AISVYYAYQR TWKPFNPILG ETYEMTNHNG INFIAEQVCH HPPMSAGHAE NEHFAYDCTS KLKTKFLGNS
201: IDVYPVGRTR VTLKRDGVVL DLVPPLTKVH NLIFGRTWVD SPGEMVMTNL TTGDKVVLYF QPCGWFGSGR YEVDGYVYNS AEEPKMLMTG KWNESLSYQP
301: CDAEGEPLPG TELKEVWKVA EAPKNDKYQY THFAHKINSF DTAPKKLLSS DSRLRPDRYA LEMGDMSKSG FEKSSLEDRQ RAEKKSREEK GQKFAPKWFD
401: ETEEVTPTPW GDLEVYQFNG KYSVHRATAE NSEDTTDVKL TQFNPWQFQD LSA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)