AT4G36950.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.679 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : mitogen-activated protein kinase kinase kinase 21 | ||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
member of MEKK subfamily | ||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
mitogen-activated protein kinase kinase kinase 21 (MAPKKK21); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: mitogen-activated protein kinase kinase kinase 19 (TAIR:AT5G67080.1); Has 107885 Blast hits to 106960 proteins in 3009 species: Archae - 125; Bacteria - 11734; Metazoa - 40866; Fungi - 11018; Plants - 26454; Viruses - 500; Other Eukaryotes - 17188 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:17422834..17423844 | ||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 36641.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 4.37 | ||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||||||||||||||||||
Length | 336 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MEWIRRETIG HGSFSTVSLA TTSGSSSKAF PSLMAVKSSG VVCSAALRNE RDVLDDLGDC SEIVRCFGEG RTVENGEEIY NLFLEYASGG SLADRIKSSG 101: EALPEFEVRR FTRSIVKGLC HIHGNGFTHC DIKLENVLVF GDGDVKISDF GLAKRRSGEV CVEIRGTPLY MAPESVNHGE FESPADIWAL GCSVVEMSSG 201: KTAWCLEDGV MNNVMSLLVR IGSGDEVPRI PVELSEEGKD FVSKCFVKNA AERWTAEMLL DHPFLAVDDE SGEEDEACSV SPRNPFDFPG WNSVQSPVND 301: SVMFGSLVGS PEERISGLVS EKVPDWSVSC DWVNVR |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)