AT4G36270.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.617 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : ATP binding | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
ATP binding; BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT4G36280.1); Has 466 Blast hits to 411 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 257; Fungi - 0; Plants - 192; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:17161159..17164227 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 55108.80 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.58 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.47 | ||||||||||||||||||||||||||||||||||||||||
Length | 486 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MDPDGLRKCM SLGYSSKKSN TTIGQYGNGF KTSTMRLGAD DIVFTRSTRG GKSTQSVGLL SYTFLRKTGQ DDVVVPMIRY AMQIDIDTSK ERPQPIIYGS 101: AEDWAASLEI ILKWSPFSTE GELWQQRSVL LTFLFPSSTH QLEDIGTHGT KVIIYNLWLN DEGIYELSFH DDNEDIRLRD ESVHDSKRAY ASMLYLKRFN 201: NFKIILRGIP VEQFNIADEL RLPETIKYNP HTTKEKAPTE IKVGFIKEAP KLAVCGFNVY HKNRLIRPFW KVTMGGERRG SGVVGVLEAN FIEPAHDKQD 301: FERSSLFQRL EARLKKIVSN YWNTHCHVFG YCTYGMPADK SKRIAIPDQP PTVNTFNPLP LPSDEISQGG QIIRDQPPTV NTFNPLPLPS DRVSQGGPII 401: REISLSNATS SRIAAVDTEN NLVGKSAHEI SEENIQLFMR CEEYVKKETE LEQTVSNLAK ELEETKSKCA RLALLVDAKR REMQQV |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)