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AT4G36270.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.617
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ATP binding
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ATP binding; BEST Arabidopsis thaliana protein match is: Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein (TAIR:AT4G36280.1); Has 466 Blast hits to 411 proteins in 50 species: Archae - 0; Bacteria - 0; Metazoa - 257; Fungi - 0; Plants - 192; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink).
Protein Annotations
EC:3.6.-.-eggNOG:NOG252733EMBL:AL022141EMBL:AL161589
EMBL:CP002687EnsemblPlants:AT4G36270EnsemblPlants:AT4G36270.1entrez:829784
Gene3D:3.30.565.10GeneID:829784GO:GO:0003677GO:GO:0003723
GO:GO:0004519GO:GO:0005524GO:GO:0005634GO:GO:0006281
GO:GO:0006282GO:GO:0016568GO:GO:0016887GO:GO:0031047
GO:GO:0031935GO:GO:0090305Gramene:AT4G36270.1hmmpanther:PTHR23336
hmmpanther:PTHR23336:SF18InParanoid:F4JPP0InterPro:IPR003594KEGG:ath:AT4G36270
ncoils:CoilOMA:TKSKCARPIR:T04596PRIDE:F4JPP0
ProteinModelPortal:F4JPP0Proteomes:UP000006548RefSeq:NP_195350.5SUPFAM:SSF55874
TAIR:AT4G36270UniGene:At.50401UniProt:F4JPP0
Coordinates (TAIR10) chr4:-:17161159..17164227
Molecular Weight (calculated) 55108.80 Da
IEP (calculated) 7.58
GRAVY (calculated) -0.47
Length 486 amino acids
Sequence (TAIR10)
(BLAST)
001: MDPDGLRKCM SLGYSSKKSN TTIGQYGNGF KTSTMRLGAD DIVFTRSTRG GKSTQSVGLL SYTFLRKTGQ DDVVVPMIRY AMQIDIDTSK ERPQPIIYGS
101: AEDWAASLEI ILKWSPFSTE GELWQQRSVL LTFLFPSSTH QLEDIGTHGT KVIIYNLWLN DEGIYELSFH DDNEDIRLRD ESVHDSKRAY ASMLYLKRFN
201: NFKIILRGIP VEQFNIADEL RLPETIKYNP HTTKEKAPTE IKVGFIKEAP KLAVCGFNVY HKNRLIRPFW KVTMGGERRG SGVVGVLEAN FIEPAHDKQD
301: FERSSLFQRL EARLKKIVSN YWNTHCHVFG YCTYGMPADK SKRIAIPDQP PTVNTFNPLP LPSDEISQGG QIIRDQPPTV NTFNPLPLPS DRVSQGGPII
401: REISLSNATS SRIAAVDTEN NLVGKSAHEI SEENIQLFMR CEEYVKKETE LEQTVSNLAK ELEETKSKCA RLALLVDAKR REMQQV
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)