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AT4G34412.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.753
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding :
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
CONTAINS InterPro DOMAIN/s: Kinase binding protein CGI-121 (InterPro:IPR013926); Has 275 Blast hits to 275 proteins in 139 species: Archae - 0; Bacteria - 5; Metazoa - 98; Fungi - 109; Plants - 42; Viruses - 0; Other Eukaryotes - 21 (source: NCBI BLink).
Protein Annotations
DNASU:829592eggNOG:ENOG4111MCNeggNOG:KOG4066EMBL:BT010697
EMBL:BT011507EMBL:CP002687EnsemblPlants:AT4G34412EnsemblPlants:AT4G34412.1
entrez:829592GeneID:829592GO:GO:0005634GO:GO:0005829
Gramene:AT4G34412.1hmmpanther:PTHR15840HOGENOM:HOG000272647InterPro:IPR013926
KEGG:ath:AT4G34412KO:K15901OMA:ITCRIASPANTHER:PTHR15840
Pfam:PF08617PhylomeDB:Q6NMZ4PRO:PR:Q6NMZ4Proteomes:UP000006548
RefSeq:NP_680763.2SMR:Q6NMZ4STRING:3702.AT4G34412.1SUPFAM:0051561
TAIR:AT4G34412UniGene:At.48936UniGene:At.66607UniProt:Q6NMZ4
Coordinates (TAIR10) chr4:-:16453099..16454515
Molecular Weight (calculated) 18827.70 Da
IEP (calculated) 7.57
GRAVY (calculated) -0.02
Length 172 amino acids
Sequence (TAIR10)
(BLAST)
001: MKVFNLDRGN TLSVSLFSGV TNSKELLNSM LDGSLKLEVS FLNASLIPDI FPLLAAAQKA LISKSRDSLS TRTLHSELVY NYSGSKHITE SLKRCGISEN
101: TTYILAARFN ASPVEMEEVA KLINGKEIDL EELKTHANQA NILKHYKITS QELGISSLGD AIVCRIAARD AL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)