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AT4G33820.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Glycosyl hydrolase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Glycosyl hydrolase superfamily protein; FUNCTIONS IN: cation binding, hydrolase activity, hydrolyzing O-glycosyl compounds, catalytic activity; INVOLVED IN: carbohydrate metabolic process; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Glycoside hydrolase, family 10 (InterPro:IPR001000), Glycoside hydrolase, catalytic core (InterPro:IPR017853), Glycoside hydrolase, subgroup, catalytic core (InterPro:IPR013781); BEST Arabidopsis thaliana protein match is: Glycosyl hydrolase superfamily protein (TAIR:AT4G33810.1); Has 2069 Blast hits to 2060 proteins in 439 species: Archae - 10; Bacteria - 1183; Metazoa - 20; Fungi - 353; Plants - 269; Viruses - 0; Other Eukaryotes - 234 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G33820-MONOMERCAZy:CBM22CAZy:GH10eggNOG:COG3693
eggNOG:ENOG410IH86EMBL:BT002790EMBL:CP002687EnsemblPlants:AT4G33820
EnsemblPlants:AT4G33820.1entrez:829524Gene3D:2.60.120.260Gene3D:3.20.20.80
GeneID:829524GO:GO:0004553GO:GO:0005975Gramene:AT4G33820.1
hmmpanther:PTHR31490hmmpanther:PTHR31490:SF18HOGENOM:HOG000237473InterPro:IPR001000
InterPro:IPR008979InterPro:IPR013781InterPro:IPR017853KEGG:ath:AT4G33820
OMA:NLAYIRSPfam:PF00331Pfscan:PS51760PhylomeDB:Q84WT5
PROSITE:PS51760Proteomes:UP000006548RefSeq:NP_680761.1SMART:SM00633
SMR:Q84WT5SUPFAM:SSF51445TAIR:AT4G33820UniGene:At.45321
unipathway:UPA00114UniProt:Q84WT5
Coordinates (TAIR10) chr4:-:16217010..16219515
Molecular Weight (calculated) 64944.40 Da
IEP (calculated) 7.17
GRAVY (calculated) -0.43
Length 570 amino acids
Sequence (TAIR10)
(BLAST)
001: MNSIKNGFFL CMIFLLWCHV DSGVSIDPFS HSHSLNTECV MKPPRSSETK GLLQFSRSLE DDSDEEWKID GNGFIREMAQ RIQLHQGNIY SFSAWVKLRE
101: GNDKKVGVVF RTENGRLVHG GEVRANQECW TLLKGGIVPD FSGPVDIFFE SENRGAKISA HNVLLKQFSK EEWKLKQDQL IEKIRKSKVR FEVTYENKTA
201: VKGVVISLKQ TKSSFLLGCG MNFRILQSQG YRKWFASRFK ITSFTNEMKW YATEKARGQE NYTVADSMLK FAEDNGILVR GHTVLWDNPK MQPSWVKNIK
301: DPNDVMNVTL NRINSVMKRY KGKLTGWDVV NENLHWDYFE KMLGANASTS FYNLAFKIDP DVRLFVNEYN TIENTKEFTA TPIKVKKMME EILAYPGNKN
401: MKGAIGAQGH FGPTQPNLAY IRSALDTLGS LGLPIWLTEV DMPKCPNQAQ YVEDILREAY SHPAVKGIII FGGPEVSGFD KLTLADKDFN NTQTGDVIDK
501: LLKEWQQKSS EIQTNFTADS DNEEEEVSLL HGHYNVNVSH PWIANLSTSF SLEVTKEMDQ DQVIRVVISA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)