AT4G33300.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 0.683 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Description (TAIR10) | protein_coding : ADR1-like 1 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
ADR1-like 1 (ADR1-L1); FUNCTIONS IN: ATP binding; INVOLVED IN: apoptosis, defense response; LOCATED IN: apoplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: NB-ARC (InterPro:IPR002182), Leucine-rich repeat (InterPro:IPR001611), Powdery mildew resistance protein, RPW8 domain (InterPro:IPR008808), Disease resistance protein (InterPro:IPR000767); BEST Arabidopsis thaliana protein match is: ADR1-like 2 (TAIR:AT5G04720.1); Has 24553 Blast hits to 16464 proteins in 567 species: Archae - 18; Bacteria - 1305; Metazoa - 2144; Fungi - 50; Plants - 20420; Viruses - 0; Other Eukaryotes - 616 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Coordinates (TAIR10) | chr4:-:16051162..16054005 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 91823.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.28 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.11 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 816 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAITDFFAGE IATELLKQLF TISTTAWRYK NTAKQLLTLI DSIRPTIKEI QYSGVELPAH RQAQIGMLFD TLEKGKKLTD KVLSSKRWNL YRQLTLARKM 101: EKLEKTISNF LKNEVFTHIL ADVHHLRADT SVRLDRVDMS LDRVIQQVGS MKIGGGGLIS EAMKRAEAME IETNDDSEKF GVGLELGKVK VKKMMFESQG 201: GVFGISGMGG VGKTTLAKEL QRDHEVQCHF ENRILFLTVS QSPLLEELRE LIWGFLSGCE AGNPVPDCNF PFDGARKLVI LDDVWTTQAL DRLTSFKFPG 301: CTTLVVSRSK LTEPKFTYDV EVLSEDEAIS LFCLCAFGQK SIPLGFCKDL VKQVANECKG LPLALKVTGA SLNGKPEMYW KGVLQRLSKG EPADDSHESR 401: LLRQMEASLD NLDQTTKDCF LDLGAFPEDR KIPLDVLINI WIELHDIDEG NAFAILVDLS HKNLLTLGKD PRLGSLYASH YDIFVTQHDV LRDLALHLSN 501: AGKVNRRKRL LMPKRELDLP GDWERNNDEH YIAQIVSIHT GEMNEMQWFD MEFPKAEILI LNFSSDKYVL PPFISKMSRL KVLVIINNGM SPAVLHDFSI 601: FAHLSKLRSL WLERVHVPQL SNSTTPLKNL HKMSLILCKI NKSFDQTGLD VADIFPKLGD LTIDHCDDLV ALPSSICGLT SLSCLSITNC PRLGELPKNL 701: SKLQALEILR LYACPELKTL PGEICELPGL KYLDISQCVS LSCLPEEIGK LKKLEKIDMR ECCFSDRPSS AVSLKSLRHV ICDTDVAFMW EEVEKAVPGL 801: KIEAAEKCFS LDWLDE |
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
See Also |
|
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)