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AT4G32260.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plastid 1.000
ASURE: plastid
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ATPase, F0 complex, subunit B/B', bacterial/chloroplast
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ATPase, F0 complex, subunit B/B', bacterial/chloroplast; FUNCTIONS IN: hydrogen ion transmembrane transporter activity; INVOLVED IN: defense response to bacterium; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast, membrane, chloroplast envelope; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, F0 complex, subunit B/B', bacterial/chloroplast (InterPro:IPR002146); Has 2587 Blast hits to 2581 proteins in 935 species: Archae - 6; Bacteria - 1820; Metazoa - 10; Fungi - 8; Plants - 73; Viruses - 1; Other Eukaryotes - 669 (source: NCBI BLink).
Protein Annotations
EC:3.6.1.34eggNOG:ENOG410IW23eggNOG:ENOG4112003EMBL:AJ245574
EMBL:AL021811EMBL:AL161580EMBL:AY058101EMBL:AY086044
EMBL:CP002687EnsemblPlants:AT4G32260EnsemblPlants:AT4G32260.1entrez:829359
GeneID:829359GO:GO:0009507GO:GO:0009534GO:GO:0009535
GO:GO:0009579GO:GO:0009735GO:GO:0009941GO:GO:0015078
GO:GO:0015986GO:GO:0016020GO:GO:0016021GO:GO:0016787
GO:GO:0042742GO:GO:0045263Gramene:AT4G32260.1HOGENOM:HOG000239964
InterPro:IPR002146KEGG:ath:AT4G32260KO:K02109ncoils:Coil
OMA:FFRPVGKPfam:PF00430PhylomeDB:Q42139PIR:T05402
Proteomes:UP000006548RefSeq:NP_194953.1SMR:Q42139STRING:3702.AT4G32260.1
TAIR:AT4G32260UniGene:At.20952UniProt:Q42139
Coordinates (TAIR10) chr4:-:15573859..15574586
Molecular Weight (calculated) 23919.00 Da
IEP (calculated) 5.52
GRAVY (calculated) -0.11
Length 219 amino acids
Sequence (TAIR10)
(BLAST)
001: MAANSIMASS KPLISLSSNQ QPNRVQIPKF AKLPQIPKSL TSSTDLRSKA LSLSSATAKS LALIAAFAPP SMAEAMEKAQ LFDFNLTLPI IVVEFLFLMF
101: ALDKVYYSPL GNFMDQRDAS IKEKLASVKD TSTEVKELDE QAAAVMRAAR AEIAAALNKM KKETQVEVEE KLAEGRKKVE EELKEALASL ESQKEETIKA
201: LDSQIAALSE DIVKKVLPS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)