AT4G32000.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 0.937 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G25220.1); Has 125172 Blast hits to 123702 proteins in 4323 species: Archae - 117; Bacteria - 14348; Metazoa - 45879; Fungi - 11007; Plants - 34429; Viruses - 566; Other Eukaryotes - 18826 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:15474083..15476655 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45844.10 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.47 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.07 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 418 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGKILHLLLL LLKVSVLEFI ISVSAFTSPA SQPSLSPVYT SMASFSPGIH MGKGQEHKLD AHKKLLIALI ITSSSLGLIL VSCLCFWVYW SKKSPKNTKN 101: SGESRISLSK KGFVQSFDYK TLEKATGGFK DGNLIGRGGF GDVYKACLGN NTLAAVKKIE NVSQEAKREF QNEVDLLSKI HHPNIISLFG YGNELSSSFI 201: VYELMESGSL DTQLHGPSRG SALTWHMRMK IALDTARAVE YLHERCRPPV IHRDLKSSNI LLDSSFNAKI SDFGLAVMVG AHGKNNIKLS GTLGYVAPEY 301: LLDGKLTDKS DVYAFGVVLL ELLLGRRPVE KLSSVQCQSL VTWAMPQLTD RSKLPKIVDP VIKDTMDHKH LYQVAAVAVL CVQPEPSYRP LITDVLHSLV 401: PLVPVELGGT LRLIPSSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)