AT4G31020.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : alpha/beta-Hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
alpha/beta-Hydrolases superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Phospholipase/carboxylesterase (InterPro:IPR003140); BEST Arabidopsis thaliana protein match is: alpha/beta-Hydrolases superfamily protein (TAIR:AT2G24320.1); Has 3837 Blast hits to 3828 proteins in 760 species: Archae - 6; Bacteria - 1176; Metazoa - 616; Fungi - 196; Plants - 292; Viruses - 6; Other Eukaryotes - 1545 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:15108832..15110079 | ||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 33214.00 Da | ||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.55 | ||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.30 | ||||||||||||||||||||||||||||||||||||
| Length | 294 amino acids | ||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGNVTSNVAA KFAFFPPEPA TYGVTKDDET GKLVFAGVSA DKNVEVHQLT TKSGNKVVAT FWRHPFARFT LLYSHGNAAD LGQMVELFIE LRAHLRVNIM 101: SYDYSGYGAS TGKPSEFNTY YDIEAVYSCL RSDYGIKQEE IILYGQSVGS GPTLHMASRL KRLRGVVLHS AILSGIRVLY PVKMTLWFDI FKNIDKIRHV 201: NSQVLVIHGT NDEIVDLSHG KRLWELAKEK YDPLWVKGGG HCNLETYPEY IKHLKKFVNA MEKLSLTNPP PKQLTNEPSI TETKHNRCLK FGKR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)