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AT4G30110.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : heavy metal atpase 2
Curator
Summary (TAIR10)
encodes a protein similar to Zn-ATPase, a P1B-type ATPases transport zinc
Computational
Description (TAIR10)
heavy metal atpase 2 (HMA2); CONTAINS InterPro DOMAIN/s: Heavy metal transport/detoxification protein (InterPro:IPR006121), ATPase, P-type, ATPase-associated domain (InterPro:IPR008250), ATPase, P-type, heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating (InterPro:IPR006404), ATPase, P-type, H+ transporting proton pump (InterPro:IPR000695), Haloacid dehalogenase-like hydrolase (InterPro:IPR005834), ATPase, P-type, K/Mg/Cd/Cu/Zn/Na/Ca/Na/H-transporter (InterPro:IPR001757), ATPase, P-type, heavy metal translocating (InterPro:IPR006416), ATPase, P-type phosphorylation site (InterPro:IPR018303); BEST Arabidopsis thaliana protein match is: heavy metal atpase 4 (TAIR:AT2G19110.1); Has 39991 Blast hits to 32019 proteins in 3203 species: Archae - 837; Bacteria - 26240; Metazoa - 4077; Fungi - 2516; Plants - 2059; Viruses - 5; Other Eukaryotes - 4257 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G30110-MONOMERBioGrid:14421BRENDA:3.6.3.5EC:3.6.3.3
EC:3.6.3.5eggNOG:COG2217eggNOG:KOG0207EMBL:AL078464
EMBL:AL161576EMBL:AY054390EMBL:AY434728EMBL:CP002687
EnsemblPlants:AT4G30110EnsemblPlants:AT4G30110.1entrez:829134Gene3D:2.70.150.10
Gene3D:3.40.1110.10Gene3D:3.40.50.1000GeneID:829134Genevisible:Q9SZW4
GO:GO:0005385GO:GO:0005524GO:GO:0005886GO:GO:0005887
GO:GO:0008551GO:GO:0015086GO:GO:0016463GO:GO:0019829
GO:GO:0043231GO:GO:0046872GO:GO:0055069GO:GO:0070574
GO:GO:0071577GO:GO:0098655Gramene:AT4G30110.1hmmpanther:PTHR24093
hmmpanther:PTHR24093:SF318HOGENOM:HOG000250399InParanoid:Q9SZW4InterPro:IPR001757
InterPro:IPR006121InterPro:IPR008250InterPro:IPR018303InterPro:IPR023214
InterPro:IPR023299InterPro:IPR027256KEGG:ath:AT4G30110KO:K01534
OMA:TEFQIYPPaxDb:Q9SZW4Pfam:PF00122Pfam:PF00702
Pfam:Q9SZW4Pfscan:PS50846PhylomeDB:Q9SZW4PIR:T08987
PRIDE:Q9SZW4PRINTS:PR00120PRO:PR:Q9SZW4PROSITE:PS00154
PROSITE:PS50846ProteinModelPortal:Q9SZW4Proteomes:UP000006548RefSeq:NP_194740.1
scanprosite:PS00154SMR:Q9SZW4STRING:3702.AT4G30110.1SUPFAM:0049471
SUPFAM:0049473SUPFAM:SSF55008SUPFAM:SSF56784TAIR:AT4G30110
tair10-symbols:ATHMA2tair10-symbols:HMA2TCDB:3.A.3.6.7TIGRfam:TIGR01494
TIGRfam:TIGR01512TIGRfam:TIGR01525TIGRFAMs:TIGR01494TIGRFAMs:TIGR01525
TMHMM:TMhelixUniGene:At.31858UniProt:Q9SZW4
Coordinates (TAIR10) chr4:-:14720253..14724577
Molecular Weight (calculated) 101995.00 Da
IEP (calculated) 6.93
GRAVY (calculated) 0.04
Length 951 amino acids
Sequence (TAIR10)
(BLAST)
001: MASKKMTKSY FDVLGICCTS EVPLIENILN SMDGVKEFSV IVPSRTVIVV HDTLILSQFQ IVKALNQAQL EANVRVTGET NFKNKWPSPF AVVSGILLLL
101: SFFKYLYSPF RWLAVAAVVA GIYPILAKAV ASLARFRIDI NILVVVTVGA TIGMQDYTEA AVVVFLFTIA EWLQSRASYK ASAVMQSLMS LAPQKAVIAE
201: TGEEVEVDEL KTNTVIAVKA GETIPIDGVV VDGNCEVDEK TLTGEAFPVP KLKDSTVWAG TINLNGYITV NTTALAEDCV VAKMAKLVEE AQNSKTETQR
301: FIDKCSKYYT PAIILISICF VAIPFALKVH NLKHWVHLAL VVLVSACPCG LILSTPVATF CALTKAATSG LLIKGADYLE TLAKIKIVAF DKTGTITRGE
401: FIVMDFQSLS EDISLQSLLY WVSSTESKSS HPMAAAVVDY ARSVSVEPKP EAVEDYQNFP GEGIYGKIDG KEVYIGNKRI ASRAGCLSVP DIDVDTKGGK
501: TIGYVYVGET LAGVFNLSDA CRSGVAQAMK ELKSLGIKIA MLTGDNHAAA MHAQEQLGNA MDIVRAELLP EDKSEIIKQL KREEGPTAMV GDGLNDAPAL
601: ATADIGISMG VSGSALATET GNIILMSNDI RRIPQAIKLA KRAKRKVVEN VVISITMKGA ILALAFAGHP LIWAAVLADV GTCLLVILNS MLLLSDKHKT
701: GNKCYRESSS SSVLIAEKLE GDAAGDMEAG LLPKISDKHC KPGCCGTKTQ EKAMKPAKAS SDHSHSGCCE TKQKDNVTVV KKSCCAEPVD LGHGHDSGCC
801: GDKSQQPHQH EVQVQQSCHN KPSGLDSGCC GGKSQQPHQH ELQQSCHDKP SGLDIGTGPK HEGSSTLVNL EGDAKEELKV LVNGFCSSPA DLAITSLKVK
901: SDSHCKSNCS SRERCHHGSN CCRSYAKESC SHDHHHTRAH GVGTLKEIVI E
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)