AT4G30020.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : PA-domain containing subtilase family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
PA-domain containing subtilase family protein; FUNCTIONS IN: identical protein binding, serine-type endopeptidase activity; INVOLVED IN: proteolysis, negative regulation of catalytic activity; LOCATED IN: endomembrane system, cell wall, membrane; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protease-associated PA (InterPro:IPR003137), Proteinase inhibitor, propeptide (InterPro:IPR009020), Peptidase S8A, DUF1034 C-terminal (InterPro:IPR010435), Peptidase S8/S53, subtilisin/kexin/sedolisin (InterPro:IPR000209), Peptidase S8, subtilisin-related (InterPro:IPR015500), Peptidase S8/S53, subtilisin, active site (InterPro:IPR022398), Proteinase inhibitor I9, subtilisin propeptide (InterPro:IPR010259); BEST Arabidopsis thaliana protein match is: subtilisin-like serine protease 3 (TAIR:AT2G19170.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:+:14678251..14681762 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 87509.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 7.31 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.09 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 816 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MDIGCKVLVF FTCFLTVTAE IYIVTMEGEP IISYKGGDNG FEATAVESDE KIDTTSELVT SYARHLERKH DMLLGMLFVE GSYKKLYSYK HLINGFAAHV 101: SPDQAEMLRR APGVKSVDRD WKVRKLTTHT PQFLGLPTDV WPTGGGYDRA GEDIVIGFID SGIFPHHPSF ASHHTTVPYG PHPSYKGKCE EDPHTKISFC 201: NGKIIGAQHF AEAAKAAGAF NPDIDFASPM DGDGHGSHTA AIAAGNNGIP VRMHGYEFGK ASGMAPRARI AVYKALYRLF GGFVADVVAA IDQAVHDGVD 301: ILSLSVGPNS PPATTKTTFL NPFDATLLGA VKAGVFVAQA AGNGGPFPKT LVSYSPWITT VAAAIDDRRY KNHLTLGNGK MLAGIGLSPS TRPHRSYKMV 401: SANDVLLGSS GMKYNPSDCQ KPEVLNKKLV EGNILLCGYS FNFVAGSASI KKVAETAKHL GAAGFVLVVE NVSPGTKFDP VPSCIPGILI TDVSKSMDLI 501: DYYNVTTSRD WMGRVKDFKA EGSIGDGLEP ILHKSAPEVA LFSARGPNTK DFSFQDADLL KPDILAPGSL IWSAWSANGT DEANYIGEGF ALISGTSMAA 601: PHIAGIAALV KQKHPQWSPA AIKSALMTTS TVIDRAGRPL QAQQYSETET VTLVKATPFD YGSGHVNPSA ALDPGLIFDA GYEDYIGFLC TTPGIDAHEI 701: KNFTNTPCNF KMVHPSNFNT PSIAISHLVR TQTVTRRVTN VAEEEETYTI TSRMEPAIAI EVSPPAMTVR AGASRTFSVT LTVRSVTGAY SFGQVTLKGS 801: RGHKVTLPVV AMGQRR |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)