AT4G28180.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: N-terminal protein myristoylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 8 growth stages; Has 1508 Blast hits to 1315 proteins in 223 species: Archae - 4; Bacteria - 127; Metazoa - 687; Fungi - 310; Plants - 142; Viruses - 28; Other Eukaryotes - 210 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr4:-:13982911..13983681 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 27610.60 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.69 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.68 | ||||||||||||||||||||||||||||
| Length | 256 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGCCFSAGKV TAPPVAAAQI PPPLEEESVK EVVVQSVSVS VPIPISVPVP VPDLVPSAPT VSDSEAQVPL PLSPPAPEIS HSKSDICSVS VSHSYSTATT 101: ATAASILEDD ALSKPHRPPP PSSSTSRRNR PDRVLRSPAE RHSPQGKQLR PRLVRERQSR QPNPTHNRRN VDSGPLPRSG LSDNPRRRSQ SPATRAPSSA 201: RRSPMKKRVG APEKDGATEV KKKEEETEKV TAEVKKEEDV TAVRDPEVSM ECFIFL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)